Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Enterobacter asburiae PDN3

 Score =  223 bits (569), Expect = 2e-63
 Identities = 111/224 (49%), Positives = 152/224 (67%), Gaps = 1/224 (0%)

Query: 5   IKILIIEDEAPIQRFLTVLISGYEYQVKVASTAEQGLHLVANWNPHLILLDLGLPDQDGI 64
           I +LI+EDE  I RFL   + G   +V  A T ++GL   A   P L++LDLGLPD DGI
Sbjct: 2   INVLIVEDEIAISRFLRAALEGDGLRVHDAGTLQRGLIEAATRKPDLVILDLGLPDGDGI 61

Query: 65  SLTRELRAWTQTPIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALRLAPS 124
              RE+R W+Q PI+V+SAR +E DK+ ALDAGA+DYL KPFG  EL AR+RVALR   +
Sbjct: 62  DFIREVRQWSQMPILVLSARTEETDKIAALDAGADDYLIKPFGIGELQARLRVALRRHSA 121

Query: 125 TESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQILKEV 184
           T   + T +  GD+ +DL  +++ +  E + LT  E+ +L +L  N GKVLT +Q+L +V
Sbjct: 122 TTPADPT-YTFGDIRVDLAARRIVRGDEEIHLTPIEFRLLAVLLNNHGKVLTQRQLLSQV 180

Query: 185 WGGNYVEHHHYVRIHVAQLRHKVEDNPAQPRFILTENGVGYRLV 228
           WG N VEH HY+RI++  LR K+E +PA+PR +LTE G+GYR +
Sbjct: 181 WGPNAVEHSHYLRIYMGHLRQKLEVDPARPRHLLTETGIGYRFM 224