Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., two-component system response regulator OmpR from Escherichia coli ECRC62

 Score =  139 bits (350), Expect = 5e-38
 Identities = 77/233 (33%), Positives = 133/233 (57%), Gaps = 5/233 (2%)

Query: 1   MNSEIKILIIEDEAPIQRFLTVLISGYEYQVKVASTAEQGLHLVANWNPHLILLDLGLPD 60
           M    KIL+++D+  ++  L   ++   +QV+  + AEQ   L+   + HL++LDL LP 
Sbjct: 1   MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPG 60

Query: 61  QDGISLTRELRAWTQT-PIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVAL 119
           +DG+S+ R LR+ +   PI++++A+ +E D++  L+ GA+DY+ KPF   EL+ARIR  L
Sbjct: 61  EDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVL 120

Query: 120 RLA----PSTESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVL 175
           R      P   S E+     G   L+L  +++ +  EP+ LT  E+ +LK L  +  + L
Sbjct: 121 RRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMPLTSGEFAVLKALVSHPREPL 180

Query: 176 THKQILKEVWGGNYVEHHHYVRIHVAQLRHKVEDNPAQPRFILTENGVGYRLV 228
           +  +++    G  Y      + + +++LR  VE++PA PR+I T  G+GY  V
Sbjct: 181 SRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAHPRYIQTVWGLGYVFV 233