Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 231 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  136 bits (342), Expect = 4e-37
 Identities = 80/226 (35%), Positives = 129/226 (57%), Gaps = 5/226 (2%)

Query: 6   KILIIEDEAPIQRFLTVLISGYEYQVKVASTAEQGLHLVANWNPHLILLDLGLPDQDGIS 65
           KIL++ED++ +  F+   +    Y V +A   + GL +    N  L++LD+ +P+ +GI 
Sbjct: 3   KILLVEDDSRVSAFIIKGLQEEGYDVALAMDGKTGLQMALQGNYDLVILDIMIPEMNGIE 62

Query: 66  LTRELRAW-TQTPIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALR---L 121
           + + LR   T  P++ ++A     + V  LD+GA+DYL+KPF   EL+AR+R  +R    
Sbjct: 63  VCKALRKQHTHVPVLFLTALGSTENVVMGLDSGADDYLSKPFKFIELLARVRTLMRRSTY 122

Query: 122 APSTESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQIL 181
           +  +ES  ++ ++ GDL LD   K V + G  + LT TEY +L +  KN  +VL+   IL
Sbjct: 123 SSGSESKTESTYQFGDLELDDETKTVLRNGMAISLTSTEYRLLLMFMKNQRRVLSRIDIL 182

Query: 182 KEVWGGNYVEHHHYVRIHVAQLRHKVEDNPAQPRFILTENGVGYRL 227
           +EVWG ++    + V ++V  LR K+E     PR I T  G+GY L
Sbjct: 183 EEVWGIDFDMGTNVVDVYVNYLRKKLEKYQG-PRLIQTVIGMGYVL 227