Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., response regulator in two-component regulatory system with CusS from Escherichia coli BL21

 Score =  137 bits (346), Expect = 1e-37
 Identities = 78/224 (34%), Positives = 132/224 (58%), Gaps = 4/224 (1%)

Query: 5   IKILIIEDEAPIQRFLTVLISGYEYQVKVASTAEQGLHLVANWNPHLILLDLGLPDQDGI 64
           +K+LI+EDE     +LT  ++   + V +A     G HL    +  LI+LD+ LPD +G 
Sbjct: 1   MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTGDYDLIILDIMLPDVNGW 60

Query: 65  SLTRELRAWTQ-TPIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALRLAP 123
            + R LR+  +  PI++++A      +V+ L+ GA+DYL KPF   EL+AR+R  LR   
Sbjct: 61  DIVRMLRSANKGMPILLLTALGTIEHRVKGLELGADDYLMKPFAFAELLARVRTLLRRGA 120

Query: 124 STESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQILKE 183
           +   + +++F++ DL++DLV ++VT++G  + LT  E+ +L+   ++ G+VL    I  +
Sbjct: 121 AV--IIESQFQVADLMVDLVSRKVTRSGTRITLTSKEFTLLEFFLRHQGEVLPRSLIASQ 178

Query: 184 VWGGNYVEHHHYVRIHVAQLRHKVEDNPAQPRFILTENGVGYRL 227
           VW  N+    + + + V +LR K+ DN  +P+ I T  GVGY L
Sbjct: 179 VWDMNFDSDTNAIDVAVKRLRGKI-DNDFEPKLIQTVRGVGYML 221