Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., two component response regulator from Agrobacterium fabrum C58

 Score =  187 bits (475), Expect = 1e-52
 Identities = 105/227 (46%), Positives = 150/227 (66%), Gaps = 4/227 (1%)

Query: 2   NSEIKILIIEDEAPIQRFLTVLISGYEYQVKVASTAEQGLHLVANWNPHLILLDLGLPDQ 61
           NS ++ILI++DE PI++ L V +S   Y V  A  A+  + LV    P L++LDLGLPD 
Sbjct: 3   NSAVRILIVDDEPPIRKLLRVGLSTQGYAVSEAMNAKVAMELVREDKPDLVVLDLGLPDV 62

Query: 62  DGISLTRELRA-WTQTPIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALR 120
            G  L  + R+     P++++S+R  EA  V+AL+ GA+DY++KPFG  EL+ARIRVALR
Sbjct: 63  SGHDLLEKWRSDGLALPVIILSSRTDEAGIVRALELGADDYISKPFGMNELVARIRVALR 122

Query: 121 LAPSTESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQI 180
               T+  E+  F+ GDL +DLV + V      VKL+  EY+IL++L ++ GKVLTH+ +
Sbjct: 123 HRLQTQG-EKPVFQTGDLSVDLVRRIVKVEDREVKLSPKEYDILRVLVQHAGKVLTHRFL 181

Query: 181 LKEVWGGNYVEHHHYVRIHVAQLRHKVEDNPAQPRFILTENGVGYRL 227
           L+ VW  + +    Y+R++V QLR K+E  P QPR+ILTE GVGYRL
Sbjct: 182 LEHVW--DELTDVQYLRVYVRQLRQKIEKLPDQPRYILTETGVGYRL 226