Pairwise Alignments

Query, 230 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 223 a.a., Transcriptional activator protein CzcR from Acinetobacter radioresistens SK82

 Score =  139 bits (349), Expect = 6e-38
 Identities = 80/223 (35%), Positives = 136/223 (60%), Gaps = 4/223 (1%)

Query: 5   IKILIIEDEAPIQRFLTVLISGYEYQVKVASTAEQGLHLVANWNPHLILLDLGLPDQDGI 64
           + ILIIEDE  I R+L   ++   Y+  +A    +GL L       L++LD+ LP+ +G 
Sbjct: 1   MNILIIEDEQKIARYLAKGLTESGYRTWLAHDGREGLMLFEQHAIDLVILDVMLPELNGW 60

Query: 65  SLTRELRAWTQTPIMVISAREKEADKVQALDAGANDYLTKPFGSEELMARIRVALRLAPS 124
            + + LR +++ P++ ++AR+   D+V+ L+ GA+DYL KPF   EL+AR++  LR + S
Sbjct: 61  QVIQTLRQFSEVPVLFLTARDSVLDRVKGLELGADDYLVKPFSYIELLARVKTLLRRS-S 119

Query: 125 TESVEQTRFELGDLVLDLVLKQVTKAGEPVKLTKTEYNILKLLAKNMGKVLTHKQILKEV 184
            + VEQ + E  +L +DL+  +V +    ++LT  EY +L+ LA++ G+++T  QI  +V
Sbjct: 120 AKVVEQLQVE--NLKIDLLEHKVYRDRNLIELTNKEYALLRFLAEHQGEIMTRTQIASQV 177

Query: 185 WGGNYVEHHHYVRIHVAQLRHKVEDNPAQPRFILTENGVGYRL 227
           W  N+    + V + V +LR K++D   QP+ I T  G+GY+L
Sbjct: 178 WNINFDTDTNVVDVAVRRLRAKIDD-AYQPKLIHTIRGMGYKL 219