Pairwise Alignments

Query, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

Subject, 883 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  173 bits (439), Expect = 2e-47
 Identities = 137/474 (28%), Positives = 217/474 (45%), Gaps = 40/474 (8%)

Query: 36  DVAMLFLLLNILSASVLKPRNAYVMMGLSIIDYHYFLLPDYQSFRFENAQYVITYAVLAF 95
           +++++FL   +L A       + V   LS + Y +  +P   SF  +  + V+T      
Sbjct: 415 NISLVFLAAVLLVAVRSSLGPSLVCAALSFLTYDFLFIPPNFSFSIQREEDVLTLLFFLL 474

Query: 96  SGIFAVNITQAQRKQIEKNKRLQQQHKKYYELACHLSALSTSEDIAQATVKFLSKEKGIV 155
                 N+   QR+Q++  +  Q++  +  +L+  L+A +  + +  A    L     + 
Sbjct: 475 MAALTGNLAARQRRQLQALRDTQEETSELLDLSRKLTAATDRQAVVSAAAHHLEGWSDLD 534

Query: 156 SAIALYQPQWQWVAQHADFPVAAIELPQPPLTDNTSTLVQDEQINAFTLVDR----GTIL 211
             +     Q  W  +                T    TL + E+  A          G   
Sbjct: 535 LCLVNRDGQGGWTIE----------------TGGPLTLTEAERAAADWAWQHDQPAGMGT 578

Query: 212 GVIYFLRY---PHERFASPEALRRES-----KIAPWVRSLLTL-------SLARAHAHRT 256
           G + F R+   P      P  L   S     +++   R LLT        +LARA   + 
Sbjct: 579 GTLPFGRWWWWPLSGEEGPLGLLGVSPKPGLELSGQRRRLLTALSQPLAQALARAQLAQE 638

Query: 257 LAHVEAEKQLESTRTTLLASVSHDLKTPLGAIIGSATTLTDPSLHLSTETQQELLTSIAE 316
           L       + E  R+ LLASVSHDL+TPL ++ GS  +L      +  E ++ELL    +
Sbjct: 639 LESARLHGETEQLRSALLASVSHDLRTPLTSMRGSIDSLLALGEAIPLEDRRELLEGTRD 698

Query: 317 QGERLNRSLTKLLDITRYTASALVPKLDWVEPEELIGTVLSRLAPRLTHHKV--QIESQP 374
           + ERL+R +  LLD+TR    AL    DWV P +++G+ L RL   L   KV   + ++ 
Sbjct: 699 EAERLDRYIQNLLDMTRLGHGALKLARDWVSPGDIVGSALGRLRAVLAPLKVSTDVPAEL 758

Query: 375 MLVELDSLLIEQVLINLVENAAKYTPRGSEIEIACAYQEQQFTLAVMDNGAGIPDEALPR 434
            L+ + + LIEQ L+N++ENAA+++P    ++++    + Q   AV D G GIP+E   +
Sbjct: 759 PLLYVHAALIEQALVNVLENAARFSPPQGRLQLSAGVADDQLFFAVADEGPGIPEEERAK 818

Query: 435 IFDRFYRVE--GNHADGTGLGLAICQVIVAAHQGSIRVHNRESG-GACFTVTIP 485
           IFD FY          GTGLGLAICQ +V AH G I V +   G G C T+ +P
Sbjct: 819 IFDMFYTAARGDRGGQGTGLGLAICQGMVGAHGGHISVADGIDGRGTCITLFLP 872