Pairwise Alignments

Query, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score =  105 bits (263), Expect = 2e-27
 Identities = 72/238 (30%), Positives = 118/238 (49%), Gaps = 15/238 (6%)

Query: 256 TLAHVEAEKQLESTRTTLLASVSHDLKTPLGAIIGSATTLTDPSLHLSTETQQELLTSIA 315
           T A  EA++Q    +   LA + H+L+ P+ A+ G    L        TE  +E+ + + 
Sbjct: 86  TKALQEADRQ----KNRFLAVLGHELRNPIMALSGGLELLEKRE---GTELAREIRSGMR 138

Query: 316 EQGERLNRSLTKLLDITRYTASALVPKLDWVEPEELIGTVLSRLAPRLTHHK----VQIE 371
              + + R +  LLDI R     +  + + +  +E++G  +  + P L   +    + + 
Sbjct: 139 RSLKHVTRLVEDLLDIARIDQGKISLRKERLHLQEVLGFAMEAVRPALEEAEHALHLDVT 198

Query: 372 SQPMLVELDSLLIEQVLINLVENAAKYTPRGSEIEIACAYQEQQFTLAVMDNGAGIPDEA 431
            +P+ ++ D   I Q++ NLV NA KYTP G  I+++         L V DNG GIP E 
Sbjct: 199 PEPIWLDADPARITQIINNLVGNAVKYTPPGGRIDLSVGRDGSSALLQVTDNGVGIPAEQ 258

Query: 432 LPRIFDRFYRVEGN---HADGTGLGLAICQVIVAAHQGSIRVHNRESG-GACFTVTIP 485
             RIF+ F ++EG      DG G+GLA+ + +V  H GSI +     G G+ F V +P
Sbjct: 259 QSRIFEIFEQIEGGARAMQDGLGIGLALVRQLVELHDGSIVLARSAVGEGSTFEVRLP 316