Pairwise Alignments

Query, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

Subject, 884 a.a., sensor protein from Pseudomonas putida KT2440

 Score =  162 bits (411), Expect = 3e-44
 Identities = 145/493 (29%), Positives = 223/493 (45%), Gaps = 32/493 (6%)

Query: 14  LVALYAMVTVVGVMYRKDMIET--DVAMLFLLLNILSASVLKPRNAYVMMGLSIIDYHYF 71
           L+AL A V   G+ +    +    +++++FL   +L A       A     LS + Y + 
Sbjct: 391 LLALLATVMAAGLAWAVSSVLALPNISLVFLAAVLLVAVRSSLGPALACAALSFLVYDFL 450

Query: 72  LLPDYQSFRFENAQYVITYAVLAFSGIFAVNITQAQRKQIEKNKRLQQQHKKYYELACHL 131
            +P   SF  +  + V+T            N+   QR+Q++  +  Q Q  +  +L+  L
Sbjct: 451 FIPPNFSFTIQREEDVLTLVFFLLMAALTGNLAARQRRQLQALRETQAQTSQLLDLSRRL 510

Query: 132 SALSTSEDIAQATVKFLSKEKGIVSAIALYQPQWQWVAQHADFPVAAIELPQPPLTDNTS 191
           +  +  + I +A  + L   +   + + L +   +   Q A          +    D   
Sbjct: 511 TVATDRQAIFKAAGQHLDGWQD--AQVCLLERNAEGQLQVASGEACTFSDTERAAADWAW 568

Query: 192 TLVQDEQINAFTLVDRGTILGVIYFLRYPHERFASPEAL-----RRESKIAPWVRSLLTL 246
              Q     + TL +         +  +P      P AL     R    ++   R LLT 
Sbjct: 569 QHGQAAGHGSDTLPNG-------RWWWWPLAVDDQPLALLGVRPRNGQPLSDPRRRLLTA 621

Query: 247 ---SLARAHAHRTLA-HVEAEK---QLESTRTTLLASVSHDLKTPLGAIIGSATTLTDPS 299
               LA+A A   LA  +EA +   + E  R+ LLASVSHDL+TPL A+ GS  +L    
Sbjct: 622 LGQPLAQALARARLAEQLEAARLHGETEQLRSALLASVSHDLRTPLTAMRGSIDSLLALG 681

Query: 300 LHLSTETQQELLTSIAEQGERLNRSLTKLLDITRYTASALVPKLDWVEPEELIGTVLSR- 358
             +  E ++ELL     + ERL+R +  LLD+TR     L    DWV P +++G+ L+R 
Sbjct: 682 DAIPAEDRRELLEGTRNEAERLDRYIQNLLDMTRLGHGGLKLARDWVAPADIVGSALNRL 741

Query: 359 ---LAPRLTHHKVQIESQPMLVELDSLLIEQVLINLVENAAKYTPRGSEIEIACAYQEQQ 415
              LAP   H  V  E   + V   + LIEQ L+N++ENAA+++P    +E+  A  + Q
Sbjct: 742 RVVLAPLRVHTDVPTELPLLFVH--AALIEQALVNVLENAARFSPANGRLELQVAVHDDQ 799

Query: 416 FTLAVMDNGAGIPDEALPRIFDRFYRVE--GNHADGTGLGLAICQVIVAAHQGSIRVHNR 473
             L V D G GIP+    +IFD FY          GTGLGLAICQ ++ AH G I V   
Sbjct: 800 LRLTVSDQGPGIPEADREKIFDMFYTAARGDRGGQGTGLGLAICQGMIGAHGGQILVGEG 859

Query: 474 ESG-GACFTVTIP 485
             G G   T+ +P
Sbjct: 860 IDGQGTSITLCLP 872