Pairwise Alignments

Query, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

Subject, 891 a.a., two-component system sensor histidine kinase KdpD from Pantoea agglomerans CFBP13505 P0401

 Score =  165 bits (418), Expect = 5e-45
 Identities = 134/490 (27%), Positives = 236/490 (48%), Gaps = 27/490 (5%)

Query: 12  LILVALYAMVTVVGVMYRKDMIETDVAMLFLLLNILSASVLKPRNAYVMMGLSIIDYHYF 71
           ++ + L  +VT  G          +  M++LL  ++ A       + +   ++I+ +  F
Sbjct: 400 MMALVLCILVTAAGQSVLIGFDPANCVMIYLLAVVIVALRYGRWPSVIATVMNIVAFDLF 459

Query: 72  LLPDYQSFRFENAQYVITYAVLAFSGIFAVNITQAQRKQIEKNKRLQQQHKKYYELACHL 131
            +    +    + QY++T+ V+   G+   N+T   R Q    +  +Q+ ++ YE+A  L
Sbjct: 460 FVAPTGTVAVSDLQYLVTFGVMLAVGVIVGNLTAGVRYQARVARYREQRARQLYEMAKSL 519

Query: 132 SALSTSEDIAQATVKFLSKEKGIVSAIALYQPQWQWVAQHADFPVA-AIELPQPPLTDNT 190
            +  T +DIA  + + L  +  + +   L  P  Q   Q    PV  A+   +P      
Sbjct: 520 GSALTPQDIAATSQRVL--DATLQARCLLLLPDEQGELQ----PVGDALPASEPDRAIAK 573

Query: 191 STLVQDEQINAFTLVDRGTILGVIYFLRYPHER---FASPEALRRESKIAPWVRSLL--- 244
            +  + +   A T         ++      H R      P+ LR+   + P  + L+   
Sbjct: 574 WSYSKGQPAGAGTDTLPAVPYQILPLKSGAHCRGLLVVEPQNLRQ--LMIPEQQRLVETF 631

Query: 245 TLSLARAHAHRTLAHVEAEKQL----ESTRTTLLASVSHDLKTPLGAIIGSATTLTDPSL 300
           T+ +A A     L+H EA  +L    E  R  LL+++SHDL+TPL  + G A  L    L
Sbjct: 632 TVLIANALERMALSHSEAASRLSAEREQLRNALLSALSHDLRTPLTVLFGQAEMLM---L 688

Query: 301 HLSTETQQEL--LTSIAEQGERLNRSLTKLLDITRYTASALVPKLDWVEPEELIGTVLSR 358
            L+++  + +   + I EQ     R ++ +LD+ R  +  L  + +W+  EE++G  LS 
Sbjct: 689 DLASDNSKYVPQASQIREQTLSTIRLVSNMLDMARIQSGGLNLREEWLALEEVVGGALSS 748

Query: 359 LAPRLTHHKVQIE--SQPMLVELDSLLIEQVLINLVENAAKYTPRGSEIEIACAYQEQQF 416
           +AP L  H+V+++     +L++ DS L+E+V  NL+EN+ KY    +   I       + 
Sbjct: 749 MAPSLKGHEVRLDLPDDIVLIKGDSTLLERVFTNLIENSLKYAGNSAPRGIRAWRAASRL 808

Query: 417 TLAVMDNGAGIPDEALPRIFDRFYRVEGNHA-DGTGLGLAICQVIVAAHQGSIRVHNRES 475
            ++V D+G GI ++ L RIFD+F+R +   A  G GLGLAIC+ I+ +H G I   NR  
Sbjct: 809 EISVWDSGPGIAEDDLSRIFDKFWRGDKESAVPGVGLGLAICKTIIESHGGQIWAENRAE 868

Query: 476 GGACFTVTIP 485
           GGA F +++P
Sbjct: 869 GGAAFRLSLP 878