Pairwise Alignments

Query, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

Subject, 1117 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  102 bits (255), Expect = 5e-26
 Identities = 80/239 (33%), Positives = 122/239 (51%), Gaps = 19/239 (7%)

Query: 261 EAEKQLESTRTTLLASVSHDLKTPLGAIIGSATTLTDPSLHLSTETQQELLTSIAEQGER 320
           EA +    T++  LA++SH+++TP+  +IG    L D  L   +E Q+    +I + GE 
Sbjct: 471 EAAEAGNRTKSEFLATMSHEIRTPMNGVIGMTGLLLDTRL---SEEQRHFAETIRDSGES 527

Query: 321 LNRSLTKLLDITRYTASALVPKLDWVEPE--ELIGTVLSRLAPRLTHHKVQIES-----Q 373
           L   +  +LD ++  A  L   LD+ E E   L+ +V+  LAPR     ++I S      
Sbjct: 528 LLTVINDILDFSKMEAGKL--DLDYTEFELVPLVESVVDILAPRAHAKGIEIASLIDPRL 585

Query: 374 PMLVELDSLLIEQVLINLVENAAKYTPRGS-EIEIACAYQEQQFTLA---VMDNGAGIPD 429
            MLV  D   + QVL+NL  NA K+T +G   IE++         +A   V D G GIP 
Sbjct: 586 RMLVRSDPGRLRQVLMNLGGNAVKFTEKGGVSIEVSLLDGPDAPAMARFDVRDTGIGIPP 645

Query: 430 EALPRIFDRFYRVEGNHA---DGTGLGLAICQVIVAAHQGSIRVHNRESGGACFTVTIP 485
           EA  R+F  F +V+ + A    GTGLGLAI + +     G + V +    G+ F +T+P
Sbjct: 646 EAQGRLFSMFSQVDASTARRYGGTGLGLAISRRLAELMGGEVGVESAVGRGSRFWITLP 704