Pairwise Alignments

Query, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

Subject, 895 a.a., sensor histidine kinase KdpD from Magnetospirillum magneticum AMB-1

 Score =  162 bits (410), Expect = 5e-44
 Identities = 125/495 (25%), Positives = 227/495 (45%), Gaps = 32/495 (6%)

Query: 13  ILVALYAMVTVVGVMYRKDM--IETDVAMLFLLLNILSASVLKPRNAYVMMGLSIIDYHY 70
           + +AL A     G+ +  D+      +++ +LL  ++ A  +  R   +    S + +++
Sbjct: 399 LALALAAAGAATGLGFAIDLWLSVASISVAYLLAVMVVAMWIGLRPGILASVASFLAFNF 458

Query: 71  FLLPDYQSFRFENAQYVITYAVLAFSGIFAVNITQAQRKQIEKNKRLQQQHKKYYELACH 130
           F      +F   + Q ++T A    +      +    R Q++ ++   ++    YE    
Sbjct: 459 FFTEPRFTFAVSDVQNLLTLAFFLIAAFIVSGMASRLRAQVQASRESARRTVNLYEFGRK 518

Query: 131 LSALSTSEDIAQATVKFLSKE-----------KGIVSAIALYQPQWQWVAQHADFPVAAI 179
           ++  +T +D+  A V  ++             +G +S +A Y P+      H D   AA 
Sbjct: 519 VTGAATQDDVLWAVVHHVADTIRGRSLVLMPVEGRLSVMAGYPPE-----DHLDDKSAAA 573

Query: 180 E----LPQPPLTDNTSTLVQDEQINAFTLVDRGTILGVIYFLRYPHERFASPEALRRESK 235
                    P    ++TL     +       R  + GV+           SP  +R    
Sbjct: 574 AEWAWSHGKPAGRGSATLPAALWLFLPLRTGRSAV-GVLGVQMSEDADLPSPAQMRLLET 632

Query: 236 IAPWVRSLLTLSLARAHAHRTLAHVEAEKQLESTRTTLLASVSHDLKTPLGAIIGSATTL 295
           +A        +++ R      +       + E  R+ LL+S+SHDL+TPL +I+G+A++L
Sbjct: 633 LADQA----AVAIERTTLVSDIEAARVATERERLRSALLSSLSHDLRTPLVSIMGAASSL 688

Query: 296 TDPSLHLSTETQQELLTSIAEQGERLNRSLTKLLDITRYTASALVPKLDWVEPEELIGTV 355
                 L    +++L  ++ ++ ERLNR +  LLD+TR  +  L P++DW +  +++G  
Sbjct: 689 ISYDDILGPADRRDLAQTVQDEAERLNRFVQNLLDMTRLGSGTLKPRIDWADLSDIVGGA 748

Query: 356 LSRLAPRLTHHKVQIESQP--MLVELDSLLIEQVLINLVENAAKYTPRGSEIEIACAYQE 413
           + R A     H V+++  P   L+ +D++L+ QV  NL++NA KY+P G+ I++      
Sbjct: 749 VERAARLTRSHAVKVDIDPDMPLLCVDAVLLGQVFFNLLDNACKYSPPGTGIKVWARRAA 808

Query: 414 QQFTLAVMDNGAGIPDEALPRIFDRFYRV--EGNHADGTGLGLAICQVIVAAHQGSIRVH 471
              ++ V D G GIP+    ++FD FYRV    +   GTGLGLAIC+ IV AH G+IR  
Sbjct: 809 DHISIEVADQGPGIPEADREKVFDMFYRVGLTDSQPAGTGLGLAICRGIVEAHGGTIRAE 868

Query: 472 -NRESGGACFTVTIP 485
                 G    + +P
Sbjct: 869 AGLHGSGTAIIIRLP 883