Pairwise Alignments

Query, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

Subject, 890 a.a., two-component system sensor histidine kinase KdpD from Erwinia tracheiphila SCR3

 Score =  168 bits (425), Expect = 8e-46
 Identities = 141/487 (28%), Positives = 231/487 (47%), Gaps = 24/487 (4%)

Query: 17  LYAMVTVVGVMYRKDMIETDVAMLFLLLNILSASVLKPRNAYVMMGLSIIDYHYFLLPDY 76
           L A+VT+ G      +   ++ M++LL  ++ A       + V   L+I+ +  F +   
Sbjct: 405 LCALVTLAGRWLLPGVDSVNLVMVYLLAVVVVALCYGRWPSVVATVLNIVAFDLFFVTPT 464

Query: 77  QSFRFENAQYVITYAVLAFSGIFAVNITQAQRKQIEKNKRLQQQHKKYYELACHLSALST 136
            +    + QY++T+ V+   G+   N+T   R Q    +  +Q+ +  YE+A  LS   +
Sbjct: 465 GTIAVSDVQYLVTFGVMLAVGVIVGNLTAGVRYQARVARYREQRVRHLYEMAKTLSRALS 524

Query: 137 SEDIAQATVKFLSKEKGIVSAIALYQPQWQWV----AQHADFPVAAIEL----PQPPLTD 188
            +DIAQ   + L       S + L   + + +    ++ +  P  AI         P   
Sbjct: 525 QQDIAQTLPRSLDATLQARSELLLPDSEGELITVGESRLSAVPDRAIARWSFDKGQPAGA 584

Query: 189 NTSTLVQDEQINAFTLVDRGTILGVIYFLRYPHERFASPEALRRESKIAPWVRSLLT-LS 247
            T TL          L      LG++        +   PE  R        + + L  + 
Sbjct: 585 GTDTL-PGVPWQILPLKAGSETLGLLVLEPLNLRQLMIPEQQRLVETFTVLIANALERIG 643

Query: 248 LARAHAHRTLAHVEAEKQLESTRTTLLASVSHDLKTPLGAIIGSATTLTDPSLHLSTETQ 307
           L++  A   LA   AE+  E  R  LL+++SHDL+TPL  + G A  LT   L L++E  
Sbjct: 644 LSQREAVSRLA---AER--EQLRNALLSALSHDLRTPLTVLFGQAEILT---LDLASEGS 695

Query: 308 QELLTSIAEQGERLN--RSLTKLLDITRYTASALVPKLDWVEPEELIGTVLSRLAPRLTH 365
                + A + + LN  R +  LLD+ R  +     + +W+  +EL+G+ L  +AP L  
Sbjct: 696 VHAPQASAMREQTLNTVRLVNNLLDMARLQSGGFSLRAEWMALDELVGSTLKMMAPSLKA 755

Query: 366 HKVQIE--SQPMLVELDSLLIEQVLINLVENAAKYTPRGSEIEIACAYQEQQF-TLAVMD 422
             V ++  ++ +L+ +D  L+E+VL NLVENA KY    + I I+     +Q+ T+AV D
Sbjct: 756 RSVVMDLPAEMLLIHVDGPLMERVLTNLVENALKYAGPQATIGISARVVSRQWLTIAVWD 815

Query: 423 NGAGIPDEALPRIFDRFYRVEGNHA-DGTGLGLAICQVIVAAHQGSIRVHNRESGGACFT 481
           +G GI D    +IF++F R     A  G GLGLAICQ I+  H+G I   NR  GGA F 
Sbjct: 816 DGPGIADGQTEQIFEKFSRGSKESAVPGVGLGLAICQAIIDIHEGRIHAENRPEGGARFV 875

Query: 482 VTIPCRQ 488
           +T+P ++
Sbjct: 876 ITLPMKE 882