Pairwise Alignments

Query, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

Subject, 900 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score =  181 bits (459), Expect = 1e-49
 Identities = 148/502 (29%), Positives = 238/502 (47%), Gaps = 62/502 (12%)

Query: 20  MVTVVGVMYRKDMIETDVAMLFLLLNILSASV---LKPRNAYVMMGLSIIDYHYFLLPDY 76
           +  +VG++  + +   ++A++FL+  +L+A+V   L P     ++G    ++ +FL P Y
Sbjct: 414 LAIIVGIVLDQTLDVQNLALVFLMA-VLAAAVRGGLGPALYASLLGALAFNF-FFLEPRY 471

Query: 77  QSFRFENAQYVITYAVLAFSGIFAVNITQAQRKQIEKNKRLQQQHKKYYELACHLSALST 136
            +    +   ++         + A N+T A ++Q    +   +  +  Y  +  L+   T
Sbjct: 472 -TLTVSSPDSLVALLFYFGVALVASNLTVAVQRQAASARSRARTTEDLYLFSKKLAGTGT 530

Query: 137 SEDIAQAT-----------VKFLSKEKGIVSAIALYQP------------QWQW-----V 168
            +D+  A            V  L  E G ++  A Y P            QW W      
Sbjct: 531 LDDVLWAAAYQMASMLKVRVVLLMPENGAIAVKAGYPPDDTLVDADIAAAQWAWEHNKAA 590

Query: 169 AQHADFPVAAIELPQPPLTDNTSTLVQDEQINAFTLVDRGTILGVIYFLRYPHERFASPE 228
            + AD    A  L  P  T +                      G +  +    +R + P 
Sbjct: 591 GRGADTLPGAKRLYLPLRTGS----------------------GAVGVVGLDDDR-SGPL 627

Query: 229 ALRRESKIAPWVRSLLTLSLARAHAHRTLAHVEAEKQLESTRTTLLASVSHDLKTPLGAI 288
               + ++   +     L++ R      +       + +  RT LL S+SHDLKTPL AI
Sbjct: 628 LTPEQQRLFDALADQAALAVERIQLASDVDRARLAAETDRLRTALLTSISHDLKTPLAAI 687

Query: 289 IGSATTLTDPSLHLSTETQQELLTSIAEQGERLNRSLTKLLDITRYTASALVPKLDWVEP 348
           +GSA TL D +  +  + + ELL++I E+ ERLNR ++ LLD+TR  + A+ P       
Sbjct: 688 LGSAGTLKDFADDIPPDARAELLSTIVEESERLNRFISNLLDMTRIGSGAMEPNYGLHFL 747

Query: 349 EELIGTVLSRLAPRLTHHKV--QIESQPMLVELDSLLIEQVLINLVENAAKYTPRGSEIE 406
            +++GT LSR A  +  H+V   I S   ++++D +L EQVL NL++NAAKY P  + I 
Sbjct: 748 GDMVGTALSRAAKIVVRHEVVLDIPSDLPMLKVDPVLFEQVLFNLIDNAAKYAPEHTTIA 807

Query: 407 IACAYQEQQFTLAVMDNGAGIPDEALPRIFDRFYRV-EGNHAD-GTGLGLAICQVIVAAH 464
           I    Q +   L+V D G GIP + L R+FD FYRV + +H   GTGLGL+IC+  + A 
Sbjct: 808 IRGWRQGKNIFLSVADEGPGIPPDDLERVFDSFYRVRKVDHVQAGTGLGLSICKGFIEAM 867

Query: 465 QGSIRVHNR-ESGGACFTVTIP 485
            GSIR  NR + GGA FT+ +P
Sbjct: 868 GGSIRAENRADRGGAQFTIGLP 889