Pairwise Alignments

Query, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

Subject, 881 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score =  111 bits (278), Expect = 9e-29
 Identities = 75/242 (30%), Positives = 115/242 (47%), Gaps = 17/242 (7%)

Query: 260 VEAEKQLESTRTTLLAS----------VSHDLKTPLGAIIGSATTLTDPSLHLSTETQQE 309
           V AE+ L+     LL +          VS++L++PL  IIG    L  P +   TE Q E
Sbjct: 630 VRAERALKEKNDALLKADELKNDFVQHVSYELRSPLTNIIGFTDLLKTPGIGQLTERQAE 689

Query: 310 LLTSIAEQGERLNRSLTKLLDITRYTASALVPKLDWVEPEELIGTVLSRLAPRLTHHKVQ 369
            L  I+     L   +  +LD+    A  +       +  EL+  V  ++A RL    + 
Sbjct: 690 YLDHISTSSSVLLTIVNDILDLATVDAGIMQLNYSDNDLNELLDDVSVQIADRLQESGIS 749

Query: 370 IESQPMLVELDSLL-----IEQVLINLVENAAKYTPRGSEIEIACAYQEQQFTLAVMDNG 424
           +E       L SL+     ++Q+LI L+ NA  + P GS ++++C   E  F  +V D G
Sbjct: 750 LEIVAP-AHLGSLVADHQRLKQILIKLLTNAINFAPEGSSVQLSCQRSEGDFVFSVADKG 808

Query: 425 AGIPDEALPRIFDRF-YRVEGNHADGTGLGLAICQVIVAAHQGSIRVHNRESGGACFTVT 483
            GIP++ L  +FDRF  R  G    G GLGL+I +  V+ H G++ + +R   G   T  
Sbjct: 809 PGIPEDMLKSVFDRFATRGNGGRRTGAGLGLSIVESFVSLHHGTVSIDSRPGNGTIVTCR 868

Query: 484 IP 485
           IP
Sbjct: 869 IP 870