Pairwise Alignments

Query, 314 a.a., ribosome biogenesis GTPase YlqF from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., LSU ribosomal maturation GTPase RbgA (B. subtilis YlqF) from Variovorax sp. SCN45

 Score =  266 bits (680), Expect = 5e-76
 Identities = 136/310 (43%), Positives = 199/310 (64%), Gaps = 6/310 (1%)

Query: 5   SIQWFPGHMHKARKEIEEAIPQVDVIIEVLDARIPFSSENPLISHIRGEKPCVKVLNKRD 64
           +IQWFPGHM+  +K I E +  +DV+IE+LDAR+P SS NP+++ +   +P +KVLNK+D
Sbjct: 2   AIQWFPGHMYATQKAITERVKDIDVVIELLDARLPGSSANPMLAELTARRPSLKVLNKQD 61

Query: 65  LADPELTELWIAHLEQEKGVKAMAITTSNPQEVHKILELCRKLAPQREEIGKNIRTMIMG 124
           LADPE T  W+AH       +A+ +  S      ++++ C +L+P R  + K +R +I G
Sbjct: 62  LADPERTVRWLAHYNALPDTRAIGLDASQTTPAQQLVKACHELSPNRGGMAKPMRVLICG 121

Query: 125 IPNVGKSTIINTLAGRAIAQTGNQPAVTRRQQRINLQNGIVLSDTPGILWPKVENPHSGF 184
           IPNVGKST+INTL G   A+TG++  +T+ +QRI L +   L DTPG+LWP++  P SG+
Sbjct: 122 IPNVGKSTLINTLTGGRKAKTGDEAGITKLEQRITLADDFYLWDTPGMLWPRIIVPKSGY 181

Query: 185 RLAATGAVKDTAMEYDEVAFYTVEYLAKHYPERLKERYQIDELPE------TDVELMEEI 238
            LAA+GAV   A + +EVA   + YL  HY   +  R+++ EL         D  L++ I
Sbjct: 182 NLAASGAVGRNAFDEEEVALELLNYLKVHYGAGVAARFKLVELDAPTMAEMKDEALLDTI 241

Query: 239 GRKRGALRAGARVDLHKASEILLHELRQGVLGQITLERPEMITEELQQVEIDEALKAEEK 298
           GRKRGAL    RV+L KA+EI++HE R G LG+ITLE PE     L   ++ +A +A +K
Sbjct: 242 GRKRGALLGKGRVNLQKAAEIVMHEFRAGNLGRITLETPEEFAGWLAAGQLADAERAAKK 301

Query: 299 AKRKEERRKR 308
           A RK++ + R
Sbjct: 302 AARKQKGKPR 311