Pairwise Alignments

Query, 314 a.a., ribosome biogenesis GTPase YlqF from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

 Score = 51.6 bits (122), Expect = 4e-11
 Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 36/186 (19%)

Query: 23  AIPQVDVIIEVLDARIPFS-SENPLISHIRG-EKPCVKVLNKRDL--ADPELTELWIAHL 78
           AI + DV++ ++D R   + ++  +  H+R  EKP + V+NK D   AD    E W   +
Sbjct: 78  AIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKVDGIDADAASAEFWQLGM 137

Query: 79  EQE--------KGVKAMAITTSNP------QEVHKILELCRKLAPQREEIGKN------- 117
           +Q         +GV A+     NP       E  ++ +L  +  P+ E++  +       
Sbjct: 138 DQMYQIAAAHGRGVGALIDRVLNPFAEQMESEQAQLEDLTNEEDPEEEQLEYSEEEAEAE 197

Query: 118 --------IRTMIMGIPNVGKSTIINTLAGRAIAQTGNQPAVTRRQQRINL---QNGIVL 166
                   I+  I+G PNVGKST+ N + G       + P  TR    I +   +   VL
Sbjct: 198 YKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVL 257

Query: 167 SDTPGI 172
            DT G+
Sbjct: 258 IDTAGV 263



 Score = 31.2 bits (69), Expect = 5e-05
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)

Query: 122 IMGIPNVGKSTIINTLAGRAIAQTGNQPAVTRRQQRINLQNG---IVLSDTPGI 172
           ++G PNVGKST+ N L     A   + P +TR ++    + G    ++ DT GI
Sbjct: 7   LVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60