Pairwise Alignments

Query, 314 a.a., ribosome biogenesis GTPase YlqF from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., GTP-binding protein EngA from Sphingobium sp. HT1-2

 Score = 42.4 bits (98), Expect = 2e-08
 Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 6/64 (9%)

Query: 122 IMGIPNVGKSTIINTLAGRAIAQTGNQPAVT--RRQQRINLQN-GIVLSDTPGILWPKVE 178
           I+G PNVGKST+ N L G+ +A   +QP VT  RR+   +L      + DT G    + E
Sbjct: 7   IVGRPNVGKSTLFNRLVGKKLALVDDQPGVTRDRREGEAHLLGLDFTIIDTAGY---EDE 63

Query: 179 NPHS 182
           +PHS
Sbjct: 64  DPHS 67



 Score = 40.8 bits (94), Expect = 6e-08
 Identities = 49/214 (22%), Positives = 83/214 (38%), Gaps = 47/214 (21%)

Query: 10  PGHMHKARKEIEEAIPQVDVIIEVLDARIPFSSENPLISHI--RGEKPCVKVLNKRDLAD 67
           PG M   R + + A+   DV + ++DAR   +  +  I+     G+ P + V NK   A+
Sbjct: 69  PGRM---RMQTQAAVENCDVALFMVDARAGITPLDEEIARWLREGDAPVILVANK---AE 122

Query: 68  PELTELWIAHLEQEKGVKAMAITTSNP-----QEVHKILELCRKLAPQRE---------- 112
            + TE  +        ++A  +    P     +    + +L + L P  E          
Sbjct: 123 GKATEAGV--------MEAFILGLGEPIPFSAEHGQGLADLFQALLPYLEREDGEEHEKE 174

Query: 113 ----EIGKNIRTMIMGIPNVGKSTIINTLAGRAIAQTGNQPAVTRRQQRINLQNGIVLSD 168
               E    ++  I+G PN GKST+IN L G     TG +  +TR    ++         
Sbjct: 175 FYEDEESAPLKLAIVGRPNAGKSTLINRLLGENRLLTGPEAGITRDSIAVDW-------- 226

Query: 169 TPGILWPKVENPHSGFRLAATGAVKDTAMEYDEV 202
               +W   E      RL  T  ++  A   D++
Sbjct: 227 ----MWTSYEGEERPVRLIDTAGMRKRAKVQDKL 256