Pairwise Alignments

Query, 314 a.a., ribosome biogenesis GTPase YlqF from Vibrio cholerae E7946 ATCC 55056

Subject, 487 a.a., GTPase Der from Pseudomonas putida KT2440

 Score = 46.6 bits (109), Expect = 1e-09
 Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 26/154 (16%)

Query: 23  AIPQVDVIIEVLDARIPFSSENPLIS-HIRGE-KPCVKVLNKRDLADPELTELWIAHL-- 78
           AI + D ++ ++DAR   ++ + +I+ H+R   K  + V NK D  DP++     + +  
Sbjct: 78  AIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKAAILVANKIDNIDPDVARAEFSPMGM 137

Query: 79  --------EQEKGVKAM-----------AITTSNPQEVHKILELCRKLAPQREEIGKNIR 119
                    Q +G+ A+           A   +  Q+V +  E  R   P  ++    I+
Sbjct: 138 GNAIPVAGSQGRGINALMEAVLGHLPRDAEEEALEQDVAEGEEAVRIPGPSEKD---GIK 194

Query: 120 TMIMGIPNVGKSTIINTLAGRAIAQTGNQPAVTR 153
             I+G PNVGKST++N + G       ++P  TR
Sbjct: 195 IAIIGRPNVGKSTLVNRMLGEERVVVYDEPGTTR 228



 Score = 32.0 bits (71), Expect = 3e-05
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 122 IMGIPNVGKSTIINTLAGRAIAQTGNQPAVTRRQQRINLQ---NGIVLSDTPGILWPKV 177
           ++G PNVGKST+ N L     A  G+   +TR +Q  +        +L DT GI   +V
Sbjct: 7   LVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTGGITGDEV 65