Pairwise Alignments

Query, 314 a.a., ribosome biogenesis GTPase YlqF from Vibrio cholerae E7946 ATCC 55056

Subject, 490 a.a., GTPase; multicopy suppressor of ftsJ from Escherichia coli BL21

 Score = 48.5 bits (114), Expect = 3e-10
 Identities = 52/191 (27%), Positives = 77/191 (40%), Gaps = 49/191 (25%)

Query: 23  AIPQVDVIIEVLDARIPFS-SENPLISHIRG-EKPCVKVLNKRDLADPE----------L 70
           AI + DV++ ++DAR     ++  +  H+R  EKP   V NK D  DP+          L
Sbjct: 78  AIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANKTDGLDPDQAVVDFYSLGL 137

Query: 71  TELWIAHLEQEKGVKAMAITTSNPQEVHKILELCRKLAPQRE--------------EIGK 116
            E++       +GV ++          H +L     LAPQ E              E G+
Sbjct: 138 GEIYPIAASHGRGVLSLL--------EHVLLPWMEDLAPQEEVDEDAEYWAQFEAEENGE 189

Query: 117 N------------IRTMIMGIPNVGKSTIINTLAGRAIAQTGNQPAVTRRQQRINLQNG- 163
                        I+  I+G PNVGKST+ N + G       + P  TR    I ++   
Sbjct: 190 EEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDG 249

Query: 164 --IVLSDTPGI 172
              VL DT G+
Sbjct: 250 REYVLIDTAGV 260



 Score = 29.6 bits (65), Expect = 2e-04
 Identities = 14/32 (43%), Positives = 19/32 (59%)

Query: 122 IMGIPNVGKSTIINTLAGRAIAQTGNQPAVTR 153
           ++G PNVGKST+ N L     A   + P +TR
Sbjct: 7   LVGRPNVGKSTLFNRLTRTRDALVADFPGLTR 38