Pairwise Alignments

Query, 314 a.a., ribosome biogenesis GTPase YlqF from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., GTPase Der from Azospirillum sp. SherDot2

 Score = 46.6 bits (109), Expect = 1e-09
 Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 34/168 (20%)

Query: 15  KARKEIEEAIPQVDVIIEVLDARIPFSSENPLISHI-----RGEKPCVKVLNKRD----- 64
           + R++ E+A+ + DV + ++DAR   +   PL  H      R + P + V NK +     
Sbjct: 71  RMRRQTEQALTRADVALFIIDARAGIT---PLDRHFAKLLRRSKTPVLLVANKTEGKASQ 127

Query: 65  ----------LADPELTELWIAHLEQEKGVKAMAITTSNPQEVHKILELCRKLAPQ---- 110
                     L DP    L   H E    +    +  + P+E  K  +      P     
Sbjct: 128 PGMFESYELGLGDP--IPLSAEHGEGMADLVEALLPYAPPEESDKAEDADDGFDPSIPIG 185

Query: 111 -----REEIGKNIRTMIMGIPNVGKSTIINTLAGRAIAQTGNQPAVTR 153
                 E+  K I+  I+G PNVGKST++N+L G     TG +  +TR
Sbjct: 186 DQPEPEEDRTKPIQIAIVGRPNVGKSTLLNSLLGEERVLTGPEAGMTR 233



 Score = 39.3 bits (90), Expect = 2e-07
 Identities = 17/33 (51%), Positives = 24/33 (72%)

Query: 121 MIMGIPNVGKSTIINTLAGRAIAQTGNQPAVTR 153
           +++G PNVGKST+ N LAG+ +A   + P VTR
Sbjct: 6   VLVGRPNVGKSTLFNRLAGKKLALVDDTPGVTR 38