Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 598 a.a., Voltage-gated ClC-type chloride channel ClcB from Xanthobacter sp. DMC5

 Score =  112 bits (280), Expect = 3e-29
 Identities = 114/424 (26%), Positives = 188/424 (44%), Gaps = 57/424 (13%)

Query: 32  SVLFLSLLVGILAGLVGTYFEQAVHLVSETRTDWLKSEIGSFLPLWLA-AFLISAFLAFI 90
           S++ ++ ++G+LAG+       A  ++S T T W+   +      WLA    +S+  A  
Sbjct: 37  SLVLIAAIMGVLAGV-------AASIMSAT-TQWMHEVL-----YWLAPGERLSSSPALA 83

Query: 91  GYFLVHRFAPEAAGSGIPEIEGAMDGMRPVRWWR---VLPVK---FFGGMGAL------- 137
             +L+    P   G+ +  I  A+      RW R   V P++     GG  +L       
Sbjct: 84  SPWLI--LVPAVGGAAMGLIALALK-----RWRRHPFVDPIEANALHGGRMSLTDSIIVA 136

Query: 138 -------GSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNA 190
                  G G  LG E    Q+G  +   +   F+++  D R  L+ AGAA G+ AAF+A
Sbjct: 137 LQTMVSNGFGASLGLEAGYSQIGSGIASRLGLTFKLRRNDLR-ILVGAGAAAGIGAAFDA 195

Query: 191 PLAGIMFVIEEMRPQFRYTLISVRAVIISAVAANIVFRVINGQDAVITMPQYDAPELSTL 250
           PL G  +  E +     Y++ +   V+   V+A +  R++      + MP    P L  +
Sbjct: 196 PLMGAFYGFEIVIGS--YSIPAAAPVLAGTVSAVMTARLLGAHVEPLHMPL--DPNLGPV 251

Query: 251 GLF--LLLGALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLTGSMIGGCFGLLLLYVP 308
            +   L LG       ++   L+T  + LF         R ++ G  IG     L LY P
Sbjct: 252 DILPILFLGLAAAAVAIVIMRLVTTVETLFGMSRIPAPLRPMVAGIGIGA----LALYSP 307

Query: 309 ELTGGGISLIPTITNGGYGAGILLLLFVGRIFTTLLCFGSGAPGGIFAPMLALGTLFGYA 368
           ++   G   + T       A + ++ F  +I  + L  GSG  GG+F   L LG L G  
Sbjct: 308 QVLSDGHGALHTQVGSAVTASVAIV-FGLKILASALSIGSGFRGGLFFASLFLGALMGKL 366

Query: 369 FGLIAKMWFPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTNNYHL----ILPLI 424
           +G +  + FP  +++P + A+ GMGAL    +  P+T   LV+EMT +  L    +   +
Sbjct: 367 YGGLLALAFPGFHLDPSVAAVVGMGALAVGVIGGPLTMSFLVLEMTRDISLSGFVMAAAV 426

Query: 425 ITSL 428
           +TSL
Sbjct: 427 VTSL 430