Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., H(+)/Cl(-) exchange transporter ClcA from Xanthobacter sp. DMC5

 Score =  292 bits (748), Expect = 1e-83
 Identities = 190/434 (43%), Positives = 252/434 (58%), Gaps = 16/434 (3%)

Query: 36  LSLLVGILAGLVGTYFEQAVHLVSETRTDW--LKSEIGSFLPLWLAAFLISAFLAFIGYF 93
           L+ LVG + G VG  F    H  +    +W  L  E      L+ A  + +A +  +  F
Sbjct: 18  LAALVGFIGGGVGAGF----HWATVKAGEWPLLLREHFQGPALYAALSVGAALMVALAVF 73

Query: 94  LVHRFAPEAAGSGIPEIEGAMDGMRPVRWWRVLPVKFFGGMGALGSGMVLGREGPTVQMG 153
           LV RFAPEAAGSG+ EIEGA++G+R VRW RVLPVKF GG+ ALGSG+V GREGPT+ MG
Sbjct: 74  LVRRFAPEAAGSGVQEIEGALEGLREVRWKRVLPVKFVGGVLALGSGLVAGREGPTIHMG 133

Query: 154 GAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNAPLAGIMFVIEEMRPQFRYTLISV 213
            ++ + ISD   +   D+R  LLAAGAA GLAAAFNAPLA I+FVIEE R QF Y L + 
Sbjct: 134 ASIAKAISDAAGLSTRDSR-GLLAAGAAAGLAAAFNAPLAAILFVIEETRRQFPYGLRTY 192

Query: 214 RAVIISAVAANIVFRVINGQDAVITMPQYDAPELSTLGLFLLLGALFGVFGVLFNYLITL 273
            AVII + A+ IV +VI G +  + M     P L  L  F+ LG + GV G+ FN  +  
Sbjct: 193 SAVIICSAASAIVAQVIGGTEPDMQMDVAAVP-LHFLPAFIGLGGVLGVVGIAFNAALVF 251

Query: 274 AQDLFVKFHRNDRKRYLLTGSMIGGCFGLLLLYVPELTGGGISLIPTITNGGYGAGILLL 333
           + D         R    +   ++G   G LL+  PE T GG  L  ++   G  A  L  
Sbjct: 252 SLDAARGLAL--RVSPYILPVVVGAAVGPLLVLRPEATFGGEMLAVSLPGMGLPALTLAG 309

Query: 334 LFVGRIFTTLLCFGSGAPGGIFAPMLALGTLFGYAFGLIAKMWFPELNIEPGMFA---IA 390
           + + R   T+  + +G PGGIFAP+LAL T  G  F  +    F   ++ P M A   IA
Sbjct: 310 IVLIRFAMTMASYSTGIPGGIFAPILALATAVGVLFATLLGSLF---SLPPQMLAACGIA 366

Query: 391 GMGALFAATVRAPITGILLVIEMTNNYHLILPLIITSLGAVIFAQLLGGQPIYSQLLHRT 450
            MG LF+ATVRAP+ G++LV E+T  Y L+LP I+T + A + A+ LGG+PIY  LL RT
Sbjct: 367 AMGGLFSATVRAPLVGMVLVAELTGAYDLLLPTILTCVTANLVAEGLGGKPIYEVLLDRT 426

Query: 451 LKNQKLQQQDLPPQ 464
           L+   + +   P Q
Sbjct: 427 LRLAGMPRPPEPEQ 440