Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., Chloride channel protein from Variovorax sp. SCN45

 Score =  138 bits (347), Expect = 4e-37
 Identities = 118/394 (29%), Positives = 192/394 (48%), Gaps = 22/394 (5%)

Query: 63  TDWLKSEIGSFLPLWLAAFLISAFLAFIGY-FLVHRFAPEAAGSGIPEIEGAMDGMRPV- 120
           +DW+  +   F   W  A L++  L   G  +   RF P A GSGIP+I+ A+    P  
Sbjct: 45  SDWVFGQFHRFYRAWPWAVLLTTPLLTAGIVWFTLRFFPGAGGSGIPQIKAALHPALPEE 104

Query: 121 -RWW----RVLPVKFFGGMGALGSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHSL 175
            R++    R+   K   G     +G+ +GREGP+VQ+   V +               +L
Sbjct: 105 RRFFFASLRLTVAKIGLGAAGFAAGLSIGREGPSVQVAAGVMQHARRWLSPNTTIDGRAL 164

Query: 176 LAAGAAGGLAAAFNAPLAGIMFVIEEM--RPQFRYTLISVRAVIISAVAANIVFRVINGQ 233
           L AG A G+AAAFNAPLAG++F IEE+  R + R + + + A++++ + A   F   +  
Sbjct: 165 LVAGGAAGIAAAFNAPLAGVVFAIEELSGRLEARSSGLIITAIVLAGLVAVSAFGNTS-Y 223

Query: 234 DAVITMPQYDAPELST-LGLFLLLGALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLT 292
             VI +P+     L   L + LL GA  G+F  L    +T A   F ++      R+   
Sbjct: 224 FGVIRVPRLGWDALGPGLLVTLLSGAAGGLFARLLTASLTGAPGRFNRWRARFPVRFAAA 283

Query: 293 GSMIGGCFGLLLLYVPELTGGGISLIPTITNGGYGAGILLLLFVGRIFTTLLCFGSGAPG 352
           G +     GL+   V    G G   +  +  G     +  L  V +   T L    G PG
Sbjct: 284 GGLAVAVIGLVTGGVT--FGAGSEAVKQMLQGH--DELTPLYTVLKFVATWLTAWCGVPG 339

Query: 353 GIFAPMLALGTLFGYAFGLIAKMWFPELNIEPGMFAIAGMGALFAATVRAPITGILLVIE 412
           GIFAP L++G   G A   ++++   EL   P + A+ GM A  AA  +AP+T  ++V+E
Sbjct: 340 GIFAPALSIGAGIGDA---VSQLGSSELG--PALIAL-GMAAFLAAVTQAPLTAFIIVME 393

Query: 413 MTNNYHLILPLIITSLGAVIFAQLLGGQPIYSQL 446
           M + + ++L L+  ++ A + ++++  +P+Y  L
Sbjct: 394 MVDGHSMVLSLMAAAMLASLVSRMI-SRPLYDTL 426