Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 585 a.a., chloride channel protein from Variovorax sp. OAS795

 Score =  109 bits (272), Expect = 3e-28
 Identities = 107/426 (25%), Positives = 184/426 (43%), Gaps = 37/426 (8%)

Query: 31  FSVLFLSLLVGILAGLVGTYFEQAVHLVSETRTDWLKSEIGSFLPLWLAAFLISAFLAFI 90
           FS +   +L+ ++      +F QA+ L         +S   + L  W+ A  +   L  +
Sbjct: 31  FSTIAARVLLDLIRFFTNLFFFQALSLAD-------RSPAANTLGAWVIAVPVIGGL-IV 82

Query: 91  GYFLVHRFAPEAA-GSGIPE-IEGAMDGMRPVRWWRVLPVKFFGGMGALGSGMVLGREGP 148
           G  LV R+  +   G GIPE IE  + G   +     L      G+  +GSG   G EGP
Sbjct: 83  G--LVARYGSDKIRGHGIPEAIEAILFGKSRMSAKVALLKPLSSGI-VIGSGGPFGAEGP 139

Query: 149 TVQMGGAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNAPLAGIMFVIE----EMRP 204
            +  GGA+G +I+  F +   + R +LL AGA  G+ A F  P+A ++  +E    E+RP
Sbjct: 140 IIMTGGAIGSLIAQHFHLTAAE-RKALLVAGATAGMTAVFGTPVAAVLLAVELLLFELRP 198

Query: 205 QFRYTLISVRAVIISAVAANIVFRVINGQDAVITMPQYDAPELSTLGLFLLLGALFGVFG 264
           +      S+  V ++   A  +  ++     +  +       L+ L   L  G   GV  
Sbjct: 199 R------SLLPVAVACAVAGFIRPLLMDPGPLFPLQTAVPGPLAMLSC-LAAGLACGVLS 251

Query: 265 VLFNYLITLAQDLFVKFHRNDRKRYLLTGSMIGG-CFGLLLLYVPELTGGGISLIPTITN 323
              +  +   +DLF K        + +    IGG   G+   + P   G G  +I  + N
Sbjct: 252 ACLSLSLYKVEDLFGKL-----PLHWMWWPAIGGLAVGIGGYFEPRALGVGYDVIGDLLN 306

Query: 324 GGYGAGILLLLFVGRIFTTLLCFGSGAPGGIFAPMLALGTLFGYAFGLIAKMWFPELNIE 383
                G++  L   +    ++  GSG  GG+ AP++ +G       GL A +       +
Sbjct: 307 NHLALGVVAALLAVKAVIWVVSLGSGTSGGVLAPLMMMGA------GLGAVLSHVLPGND 360

Query: 384 PGMFAIAGMGALFAATVRAPITGILLVIEMTNNYHLILPLIITSLGAVIFAQLLGGQPIY 443
           P ++ +  M A     +RAP+T  +    +T++ + +LPL+ TS  A  F  L   + I 
Sbjct: 361 PLLWPLVCMAATLGGVMRAPLTATIFAFGLTHDSNALLPLLATSAVAYGFTVLTMRRSIL 420

Query: 444 SQLLHR 449
           ++ + R
Sbjct: 421 TEKIAR 426