Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., chloride channel protein from Variovorax sp. OAS795

 Score =  130 bits (327), Expect = 9e-35
 Identities = 124/435 (28%), Positives = 198/435 (45%), Gaps = 50/435 (11%)

Query: 63  TDWLKSEIGSFLPLWLAAFLISAFL--AFIGYFLVHRFAPEAAGSGIPEIEGAMDGMRPV 120
           +DW+  +   F   W  A L++  L  A I +F + RF P A GSGIP+I+  +    P 
Sbjct: 45  SDWVFGQFHRFYRAWPWAVLLTTPLITAAIVWFTL-RFFPGAGGSGIPQIKATLHPALPE 103

Query: 121 RW------WRVLPVKFFGGMGALGSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHS 174
                    R+   K   G     +G+ +GREGP+VQ+   V +               +
Sbjct: 104 ERRFMFASLRLTVAKIGLGAAGFAAGLSIGREGPSVQVAAGVMQHARRWLSPNTTIDSRA 163

Query: 175 LLAAGAAGGLAAAFNAPLAGIMFVIEEM--RPQFRYTLISVRAVIISAVAANIVFRVING 232
           LL AG A G+AAAFNAPLAG++F IEE+  R + R + + + A++++ + A   F  ++ 
Sbjct: 164 LLVAGGAAGIAAAFNAPLAGVVFAIEELSGRLEARSSGLIITAIVLAGLVAVSAFGNLS- 222

Query: 233 QDAVITMPQ--YDAPELSTLGLFLLLGALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYL 290
              VI +P+  +DA     LG  LL+  L G  G LF  L+  +           R RY 
Sbjct: 223 YFGVIRVPRLGWDA-----LGPGLLVTLLSGAAGGLFARLLIASLTGGAGRFNRWRARYP 277

Query: 291 LTGSMIGGCFGLLLLYVPELTGG-----GISLIPTITNGGYGAGILLLLFVGRIFTTLLC 345
           +       C GL +  +  +TGG     G   +  +  G     +  L    +   T L 
Sbjct: 278 VR---FAACGGLAVAVIGLVTGGVTFGAGSEAVKQMLQGH--DELTPLYTALKFVATWLT 332

Query: 346 FGSGAPGGIFAPMLALGTLFGYAFGLIAKMWFPELNIEPGMFAIAGMGALFAATVRAPIT 405
              G PGGIFAP L++G   G A   +    F      P + A+ GM    AA  +AP+T
Sbjct: 333 AWCGVPGGIFAPSLSIGAGIGDAVAGLTGSEFG-----PALIAM-GMAGFLAAVTQAPLT 386

Query: 406 GILLVIEMTNNYHLILPLIITSLGAVIFAQLLGGQPIYSQL--------------LHRTL 451
             ++V+EM + + ++L L+  ++ A + ++++  +P+Y  L              +HRT 
Sbjct: 387 AFIIVMEMVDGHSMVLSLMAAAMLASLVSRMI-SRPLYETLAEHMVARAIGSIEPVHRTA 445

Query: 452 KNQKLQQQDLPPQSP 466
                ++   P  SP
Sbjct: 446 PAAPAEKPPQPAPSP 460