Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., Chloride channel protein from Sphingobium sp. HT1-2

 Score =  134 bits (338), Expect = 5e-36
 Identities = 143/447 (31%), Positives = 201/447 (44%), Gaps = 43/447 (9%)

Query: 24  LSKDKTPFSVLF---LSLLVG-ILAGLVGTYFEQAVHLVSETRTDWLKSEIGSFLPLWLA 79
           L +   P S+LF   L+L+ G +L GL    F  A      T      +    +LPL L 
Sbjct: 16  LLRHSGPTSLLFRRRLALIGGAVLVGLAALAFAWAAD--EATEAFHRLATANRWLPLLLT 73

Query: 80  AFLISAFLAFIGYFLVHRFAPEAAGSGIPEIEGAMDGMRPVRWW----RVLPVKFFGGMG 135
               +A       ++    AP A GSGIP++  A      V       R+  +K    + 
Sbjct: 74  PLGFAALA-----WITRSVAPFAGGSGIPQVIAATQLPEKVGRCLVDLRMALLKVVLTIA 128

Query: 136 ALGSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNAPLAGI 195
            L  G  +GREGPTVQ+  A+   ++ +  + N   R S++ AG A G+AAAFN PLAGI
Sbjct: 129 GLLVGASVGREGPTVQISAAI---LARVHALLNVPLRASVMVAGGAAGVAAAFNTPLAGI 185

Query: 196 MFVIEEMRPQF--RYTLISVRAVIISAVAANIVFRVINGQDAVITMPQYDAPELSTLGLF 253
            F IEE+   +  R TL+ + AVIIS +    V   + G            P  S + + 
Sbjct: 186 AFAIEELASAYEQRMTLLVITAVIISGM----VSLGVAGDYVYFGAVAAHLPLQSAVPVA 241

Query: 254 LLLGALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLTGSMI--GGCFGLLLLYVPELT 311
           LL G L G+ G LF  L   A        RN    ++    ++  GGC GLL+  +   T
Sbjct: 242 LLAGLLGGMSGGLFARLALDAATA-----RNRMTDWMRAHPVLFAGGC-GLLVAAIGVAT 295

Query: 312 G--GGISLIPTITNGGYGAGILLLLFVGRIFTTLLCFGSGAPGGIFAPMLALGTLFGYAF 369
           G   G S  P  T    G    L     +  +TL    SG PGGIFAP LA G      F
Sbjct: 296 GLTWGTSYAPARTMIA-GGDQPLWFAPAKFLSTLATSVSGIPGGIFAPSLATGA----GF 350

Query: 370 GLIAKMWFPELNIEPGMFAIA-GMGALFAATVRAPITGILLVIEMTNNYHLILPLIITSL 428
           G + +  FP    EP    +  GM A F   VRAP+T ++++ E T +   +LPL+  +L
Sbjct: 351 GNLLRWIFPG---EPASAVVLLGMVAYFTGVVRAPLTAVIIISETTGSRGFMLPLLGAAL 407

Query: 429 GAVIFAQLLGGQPIYSQLLHRTLKNQK 455
            A   AQ+   + +Y  L    L+  K
Sbjct: 408 VADASAQIFCRERLYHGLSRNFLERAK 434