Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 584 a.a., Chloride channel protein from Sphingobium sp. HT1-2

 Score =  102 bits (254), Expect = 3e-26
 Identities = 90/322 (27%), Positives = 151/322 (46%), Gaps = 29/322 (9%)

Query: 138 GSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNAPLAGIMF 197
           G+G  +G E    QMGG V  ++    +++  D R +L+ AGA  G+ AAF APLAG  +
Sbjct: 131 GAGASVGLEAAYAQMGGGVASLLGQWLKLRRNDLR-TLVGAGAGAGVGAAFGAPLAGAFY 189

Query: 198 VIEEMRPQFRYTLISVRAVIISAVAANIVFRVINGQDAVITMPQYDAPELSTLGLFLLLG 257
             E +     YT  ++  V+ +A++A  V R +  +  +I          +   L++LLG
Sbjct: 190 AFEIVIGH--YTPAAIAPVVAAALSAAFVTRALGVEPWLIATTADRILGTADYLLYVLLG 247

Query: 258 ALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLTGSMIGGCFGLLLLYVPELTGGGISL 317
            L    G+L   ++T A+     +    R R      +IGG   LLL+ +  LT      
Sbjct: 248 LLCAGLGILIMRMVTFAELRVQGWTWPGRWR-----PVIGG---LLLMPLAWLT------ 293

Query: 318 IPTITNGGYGA-----------GILLLLFVGRIFTTLLCFGSGAPGGIFAPMLALGTLFG 366
            P   + G+GA            +LL++   +I  +++    G  GG+F   L LG+L G
Sbjct: 294 -PQTLSAGHGALHLNLILLPDWTVLLMILCLKIAASVISLSFGFRGGLFFASLFLGSLAG 352

Query: 367 YAFGLIAKMWFPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTNNYHLILPLIIT 426
             F  I  +     +++P   A+ GM AL  A V  P+T  LL++E T+++ L+  ++  
Sbjct: 353 QIFAQIVDLVGIGWSLDPNDAALVGMAALSVAIVGGPMTLGLLMLETTHDFQLMGVVLTA 412

Query: 427 SLGAVIFAQLLGGQPIYSQLLH 448
           SL +    + + G    +  LH
Sbjct: 413 SLLSSAVTREMFGYSFSTWRLH 434