Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., H(+)/Cl(-) exchange transporter ClcA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  519 bits (1337), Expect = e-152
 Identities = 253/450 (56%), Positives = 331/450 (73%)

Query: 17  KDVINQFLSKDKTPFSVLFLSLLVGILAGLVGTYFEQAVHLVSETRTDWLKSEIGSFLPL 76
           +D I + + +DKTP ++LF++ +VG L GLVG  FE+AV  V   R   L         L
Sbjct: 19  RDQIRRLMQRDKTPLAILFMAAVVGTLTGLVGVAFEKAVSWVQNMRIGALVQVADHAFLL 78

Query: 77  WLAAFLISAFLAFIGYFLVHRFAPEAAGSGIPEIEGAMDGMRPVRWWRVLPVKFFGGMGA 136
           W  AF++SA LA +GYFLV +FAPEA GSGIPEIEGA++ +RPVRWWRVLPVKF GGMG 
Sbjct: 79  WPLAFILSALLAMVGYFLVRKFAPEAGGSGIPEIEGALEELRPVRWWRVLPVKFIGGMGT 138

Query: 137 LGSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNAPLAGIM 196
           LG+GMVLGREGPTVQ+GG +GRM+ D+FR+++ + RH+LLA GAA GL+AAFNAPLAGI+
Sbjct: 139 LGAGMVLGREGPTVQIGGNLGRMVLDVFRMRSAEARHTLLATGAAAGLSAAFNAPLAGIL 198

Query: 197 FVIEEMRPQFRYTLISVRAVIISAVAANIVFRVINGQDAVITMPQYDAPELSTLGLFLLL 256
           F+IEEMRPQFRY LIS++AV    + ++IVFR+ NG+  +I + +     ++TL L+L+L
Sbjct: 199 FIIEEMRPQFRYNLISIKAVFTGVIMSSIVFRIFNGEAPIIEVGKLSDAPVNTLWLYLIL 258

Query: 257 GALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLTGSMIGGCFGLLLLYVPELTGGGIS 316
           G +FG  G +FN L+   QD+F +FH  + K+++L G  IGG  G+L L  P   GGG +
Sbjct: 259 GIIFGCVGPVFNSLVLRTQDMFQRFHGGEIKKWVLMGGAIGGLCGILGLIEPAAAGGGFN 318

Query: 317 LIPTITNGGYGAGILLLLFVGRIFTTLLCFGSGAPGGIFAPMLALGTLFGYAFGLIAKMW 376
           LIP    G +  G+LL +F+ R+ TTLLCF SGAPGGIFAPMLALGTL G AFG+ A + 
Sbjct: 319 LIPIAAAGNFSVGLLLFIFITRVVTTLLCFSSGAPGGIFAPMLALGTLLGTAFGMAAAVL 378

Query: 377 FPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTNNYHLILPLIITSLGAVIFAQL 436
           FP+ ++E G FAIAGMGAL AA+VRAP+TGI+LV+EMT+NY LILP+IIT LGA + AQ 
Sbjct: 379 FPQYHLEAGTFAIAGMGALMAASVRAPLTGIVLVLEMTDNYQLILPMIITCLGATLLAQF 438

Query: 437 LGGQPIYSQLLHRTLKNQKLQQQDLPPQSP 466
           LGG+P+YS +L RTL  Q  +Q +    +P
Sbjct: 439 LGGKPLYSTILARTLAKQDAEQAEKNQNAP 468