Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., FIG00509904: hypothetical protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  139 bits (351), Expect = 1e-37
 Identities = 120/429 (27%), Positives = 195/429 (45%), Gaps = 32/429 (7%)

Query: 31  FSVLFLSLLVGILAGLVGTYFEQAVHLVSETRTDW--LKSEIGSF------LPLWLAAFL 82
           F  L ++ L+GILA L    F  A+ L+     +W  L ++ GS       L  W     
Sbjct: 14  FRRLLIATLIGILAALAVAAFRHAMQLL-----EWIFLSNDTGSLVNAAEGLSPWRRLIT 68

Query: 83  -----ISAFLAFIGYFLVHRFAPEAAGSGIPEIEGAMDGMRPVRWWRVLPVKFFGGMGAL 137
                ++A L   G+  +++  P A    +  ++   DG   V       VK    +  +
Sbjct: 69  PALGGLAAGLLLWGWQKMNQQRPHAPTDYMEALQ--TDGQFDVG---ASLVKSLASLLVV 123

Query: 138 GSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNAPLAGIMF 197
            SG  +GREG  + +        +  F  + E      +A+GAA G+A A++APLAG +F
Sbjct: 124 VSGSAIGREGAMILLAALAASSFARRFTPREE--WKLWIASGAAAGMAGAYHAPLAGSLF 181

Query: 198 VIEEMRPQFRYTLISVRAVIISAVAANIVFRVINGQDAVITMPQYDAP-ELSTLGLFLLL 256
           + E +       L S+  V++SAV A +   V+NG D+++               + +  
Sbjct: 182 IAEILFGTLM--LASLGPVVVSAVVALLTTHVLNGSDSLLYTVHLTVDLHAREYVMIVST 239

Query: 257 GALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLTGSMIGGCFGLLLLYVPELTGGGIS 316
           G + G+ G L  +L+T + + F++   +   +  L G ++G    LL L  P + G G S
Sbjct: 240 GLVAGLCGPLLMWLMTASHNSFLRLKLSPPWQLALGGLIVG----LLSLLTPTVWGNGYS 295

Query: 317 LIPTITNGGYGAGILLLLFVGRIFTTLLCFGSGAPGGIFAPMLALGTLFGYAFGLIAKMW 376
           ++ +         ++  +FV +I   L   GSGAPGG+F P L +G   G   G I   W
Sbjct: 296 VVQSFLLSPPLFSLIGGIFVCKILAVLASSGSGAPGGVFTPTLFVGLSIGMFLGRIWGFW 355

Query: 377 FPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTNNYHLILPLIITSLGAVIFAQL 436
            P  +    +  +AGM  L AAT  API   L++ EMT  Y L+  L+I  + A + ++ 
Sbjct: 356 LPGSDEIAILLGLAGMATLLAATTHAPIMSTLMICEMTGEYQLLPGLLIACVVASVLSRT 415

Query: 437 LGGQPIYSQ 445
           L    IY Q
Sbjct: 416 LRHDSIYRQ 424