Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., H(+)/Cl(-) exchange transporter ClcA from Dickeya dadantii 3937

 Score =  504 bits (1298), Expect = e-147
 Identities = 261/448 (58%), Positives = 323/448 (72%), Gaps = 1/448 (0%)

Query: 10  SLLAKMPKDVINQFLSKDKTPFSVLFLSLLVGILAGLVGTYFEQAVHLVSETRTDWLKSE 69
           SL A +    I Q + +DKTP  +L ++ L G L GL+G  F QAV+ V   R   L S+
Sbjct: 6   SLPAAVRSAAIRQLVRRDKTPAYILVMAALTGTLVGLLGVGFNQAVNAVQHWRLALLSSQ 65

Query: 70  IGSFLPLWLAAFLISAFLAFIGYFLVHRFAPEAAGSGIPEIEGAMDGMRPVRWWRVLPVK 129
            GS   +W  + LISA LA  GY+LV RFAPEA GSGIPEIEGA++ +RPVRWWRVLPVK
Sbjct: 66  SGSGW-VWPLSILISAGLAMFGYWLVRRFAPEAGGSGIPEIEGALEDLRPVRWWRVLPVK 124

Query: 130 FFGGMGALGSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFN 189
           FFGGMG LG+GMVLGREGPTVQ+GG VG M++D+F V+  + RHSLLA  AA GL AAFN
Sbjct: 125 FFGGMGTLGAGMVLGREGPTVQLGGNVGGMVADLFPVRKPEVRHSLLATAAAAGLTAAFN 184

Query: 190 APLAGIMFVIEEMRPQFRYTLISVRAVIISAVAANIVFRVINGQDAVITMPQYDAPELST 249
           APLAGI+F+IEEMRPQFRY LIS++AV I  + A++V+R + G+ AVI + Q  +  + T
Sbjct: 185 APLAGILFIIEEMRPQFRYNLISIKAVFIGVIMASVVYRWLEGEQAVIDVGQLPSAPVGT 244

Query: 250 LGLFLLLGALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLTGSMIGGCFGLLLLYVPE 309
           L L+LLLG LFG  GVLFN L+  AQ  F++FH +   R+LL G + GG  GLL L   +
Sbjct: 245 LWLYLLLGILFGAVGVLFNALVLGAQARFLRFHGHSMPRFLLVGLLAGGVSGLLTLAFSD 304

Query: 310 LTGGGISLIPTITNGGYGAGILLLLFVGRIFTTLLCFGSGAPGGIFAPMLALGTLFGYAF 369
            TGGG SLIP      YG G+LL +F+ R+  TLLCF SGAPGGIFAPML+LGTL G AF
Sbjct: 305 ATGGGFSLIPVAAAEHYGVGMLLTIFLARVGMTLLCFCSGAPGGIFAPMLSLGTLLGAAF 364

Query: 370 GLIAKMWFPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTNNYHLILPLIITSLG 429
           G++    FP   +  G FA+AGMGALFAA+VRAP+TGI+LV+EMT+NY LILP+IIT LG
Sbjct: 365 GMVCAHLFPAWELGAGTFAVAGMGALFAASVRAPLTGIVLVLEMTDNYQLILPMIITCLG 424

Query: 430 AVIFAQLLGGQPIYSQLLHRTLKNQKLQ 457
           A + AQ LGG+P+YS +L RTL  Q  Q
Sbjct: 425 ATLVAQFLGGKPLYSCILARTLARQAQQ 452