Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., chloride channel protein from Dickeya dadantii 3937

 Score =  126 bits (316), Expect = 2e-33
 Identities = 117/420 (27%), Positives = 188/420 (44%), Gaps = 40/420 (9%)

Query: 39  LVGILAGLVGTYFEQAVHLVSETRTDWLKSEI---GSFLPLWLAA--------FLISAFL 87
           L G+LAG+ G      +H +      +   +I    SFL    AA         LI   +
Sbjct: 17  LTGLLAGIGGMLLALLLHAIQHLAYGYSLDQIISEESFLQGVSAAEPARRFMALLIGGVV 76

Query: 88  AFIGYFLVHRFAPEAAGSGIPEIEGAMDGMRPVRWWRVLPVK-----FFGGMGALGSGMV 142
           A +G++ ++R+     G  +  I  A+   +P      +PVK         +  +  G  
Sbjct: 77  AGLGWYALYRY-----GRRLVSISSALQAEKPASPVNDMPVKETIIHALLQIITVALGSP 131

Query: 143 LGREGPTVQMGGAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNAPLAGIMFVIEEM 202
           LGRE    ++G      +S   R+  EDTR  L+A GA GGLAA +N PL G +FV+E +
Sbjct: 132 LGREVAPRELGALAANHLSRALRMTPEDTR-LLIACGAGGGLAAVYNVPLGGALFVVEVL 190

Query: 203 --RPQFRYTLISVRAVIISAVAANIVFRVINGQDAV--ITMPQYDAPELSTLGLFLLLGA 258
             R Q + +L    A +++   A +V R   G +    + +P   + +L+   L  L G 
Sbjct: 191 LARVQVKTSL----AALLTCSLAALVARAGLGDEYQYHLNLPLSVSGDLTLWAL--LTGP 244

Query: 259 LFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLTGSMIGGCFGLLLLYVPELTGGGISLI 318
           +FGV   LF  L   A+      H     R ++T  +     GLL++ +P L G G    
Sbjct: 245 IFGVAAWLFVRLTRHARQ-----HSPQNARLIITNLLNFTLLGLLVIILPPLAGNGKGPA 299

Query: 319 PTITNGGYGAGILLLLFVGRIFTTLLCFGSGAPGGIFAPMLALGTLFGYAFGLIAKMWFP 378
                      + LLL   ++        +GA GG+  P LA G L   A G +   +FP
Sbjct: 300 ELSFTSQLPVLLALLLLGCKVLVQWSSLRAGAQGGLLTPGLANGALLAVALGGVWSWFFP 359

Query: 379 ELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTN-NYHLILPLIITSLGAVIFAQLL 437
             + +PG +A+ G  A  A ++R P+T ++L++E T  N    +P+ +   GAV  + L+
Sbjct: 360 --HNQPGAYAVIGAAAFLATSMRMPVTSLVLIMEFTRINNDFFVPMALCIAGAVSTSMLI 417