Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., H(+)/Cl(-) exchange transporter ClcA from Azospirillum sp. SherDot2

 Score =  117 bits (294), Expect = 6e-31
 Identities = 122/424 (28%), Positives = 190/424 (44%), Gaps = 59/424 (13%)

Query: 39  LVGILAGLVGTYFEQAVHLVSETRTDWLKSEIGSFLPLWLAAFLISAFLAFIGYFLVHRF 98
           LV +L      Y +Q   L +E  + WL   +    PL LA   +SA++A        R 
Sbjct: 46  LVAVLFARAADYAQQLFRL-AEAASPWLPFLL---TPLGLA---VSAWVAL-------RV 91

Query: 99  APEAAGSGIPEIEGAMDGMRPVRWWRVLPVKFFGG-----MGALGSGMVLGREGPTVQMG 153
            P + GSGIP+   A     P    R+L  +   G     +  L  G  +GREGPTVQ+G
Sbjct: 92  VPGSQGSGIPQAIAARHVQDPAVKRRLLSPRIAVGKILLTLVGLACGASIGREGPTVQVG 151

Query: 154 GAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNAPLAGIMFVIEEMRPQFRYTLISV 213
            ++  M   +  +  E     L+ AG A G+AAAFN PLAGI+F IEEM   F      +
Sbjct: 152 ASIMLMAGSLAGLGREP---GLILAGGAAGVAAAFNTPLAGIVFAIEEMARSFERRTSGL 208

Query: 214 RAVIISAVAANIVFRVINGQDAVITMPQYDAPELSTLGLFLLLGALFGVFGVLFNYLITL 273
             V+++ VAA +V   + G  A        A         L  G + G+ G  F+ L+  
Sbjct: 209 --VLVAVVAAGLVAVALLGNYAYFGHTAASA-SWQDWKAVLATGLVGGLAGGGFSSLLLW 265

Query: 274 AQDLFVKFHRNDRKRYLLTGSMIGGCFGLLLLYVPELTGGGISLIPTITNG-----GYGA 328
                         R++  G  +GG  G   ++V    G  +++I T T G     GY  
Sbjct: 266 L------------SRWIRCG--LGGRIGRHPVFVALGCGLALAVIGTATGGLTFGTGYEQ 311

Query: 329 GILLLLFV---------GRIFTTLLCFGSGAPGGIFAPMLALGTLFGYAFGLIAKMWFPE 379
              +L  V          ++  T L    G PGGIF+P L++G   G   G +     P 
Sbjct: 312 ARAVLDGVETLPWYYAPAKLLATALSGICGIPGGIFSPSLSVGAGIGSIIGGL----LPG 367

Query: 380 LNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTNNYHLILPLIITSLGAVIFAQLLGG 439
            ++E     +  M + FA  V+AP+T +++V EM+ +  ++LPL++++  A   ++L+  
Sbjct: 368 TSLE--AVVLLSMVSYFAGVVQAPLTAVVIVTEMSASPDMLLPLMLSAALATTLSRLVCP 425

Query: 440 QPIY 443
             +Y
Sbjct: 426 HSVY 429