Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., H(+)/Cl(-) exchange transporter ClcA from Alteromonas macleodii MIT1002

 Score =  140 bits (354), Expect = 8e-38
 Identities = 112/438 (25%), Positives = 203/438 (46%), Gaps = 22/438 (5%)

Query: 15  MPKDVINQFLSKDKTPFSVLFLSLLVGILAGLVGTYFEQAVHLVSETRTDWLKSEIGSFL 74
           M    + + ++  +T   +  L ++ G  A L+   F   V  + ET    L+S +    
Sbjct: 1   MRLQALREEVAHPRTSIQLCMLGIVGGTCAALIIILFRLCVEWLQETGVSSLQSVLTYDW 60

Query: 75  PLWLAAFLISA----FLAFIGYFLVHRFAPEAAGSGIPEIEGAMDGMRPVRWWRVLPVKF 130
            +WL    IS     F+AF+  F  +R        GIP +   +        +R    +F
Sbjct: 61  LVWLIMPFISVGLILFIAFLTGFKHYRL-------GIPFVIHRVKYYYGHVPFRTTINQF 113

Query: 131 FGGMGALGSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNA 190
           FGGM AL  G V+GREGP+V +G +    +    R+     R  L   G A G++A+FN 
Sbjct: 114 FGGMLALAGGFVVGREGPSVHLGASGSSFLGQWLRLPYNSIR-ILAGCGIAAGISASFNT 172

Query: 191 PLAGIMFVIEEMRPQFRYTLISVRAVIISAVAANIVFRVINGQDAVITMPQYDAPELSTL 250
           P A ++FV+E +  +++  +     V+++A   +++ R++ G+   ++   ++A      
Sbjct: 173 PFAAVIFVMEVVLREYKIHIFV--PVMLAAACGSVLTRIVFGEVNELSFLSFNAFSQWMY 230

Query: 251 GLFLLLGALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLTGSMIGGCFGLLLLYVPEL 310
              +LLG L G+  VLFN  +      F       R   L+  ++I G  G+   ++PE 
Sbjct: 231 FYLVLLGILLGMLAVLFNSQLMRVMTWFRPVSMVWR---LILAALITGTIGM---FIPEA 284

Query: 311 TGGGISLIPTITNGGYGAGILLLLFVGRIFTTLLCFGSGAPGGIFAPMLALGTLFGYAFG 370
            G     +  + +   GA +L+   V ++   +   G G PGGI  P++ +G L G A  
Sbjct: 285 LGANFIDVEHLFDSSPGALLLVSTLVFKVILAVFAIGLGIPGGIIGPVMVIGMLAG-AVL 343

Query: 371 LIAKMWFPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTNNYHLILPLIITSLGA 430
           L+   +F ++      FA+ G+  +  A + AP+  +  V+E++ +  +ILP ++  + A
Sbjct: 344 LLPLSYFIDVPEFTNSFALLGIAGMLTAVLHAPLAALSAVMELSYSPQIILPAMLVIVPA 403

Query: 431 -VIFAQLLGGQPIYSQLL 447
            V   Q  G + I+ + L
Sbjct: 404 YVTSTQFFGNRSIFIRQL 421