Pairwise Alignments

Query, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 593 a.a., chloride channel protein from Agrobacterium fabrum C58

 Score = 94.7 bits (234), Expect = 7e-24
 Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 11/293 (3%)

Query: 138 GSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNAPLAGIMF 197
           G G  +G E    Q+   V   I    +++  D R  L+  GAAG +AAAFNAPL G  +
Sbjct: 136 GFGASVGLEAGYTQIASGVASKIGIKLKLRRGDMR-ILVGCGAAGAIAAAFNAPLTGAFY 194

Query: 198 VIEEMRPQFRYTLISVRAVIISAVAANIVFRVINGQDAVITMPQYDAPELSTLGLFLLLG 257
            IE +     YT++++  +I+SA+ A  V  +I G    I +        +     + LG
Sbjct: 195 AIELIIGT--YTVVTLAPLIVSALVATTVIGLIGGHGLSIDIVDASRVTPADYVPAIFLG 252

Query: 258 ALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLTGSMIGGCFGLLLLYVPELTGGGISL 317
            +    G++    ++  ++   K       R  L G  +GG    L L  P++   G   
Sbjct: 253 VVCAAIGIVLMQAVSFIEETARKSAIPGWLRPTLGGVAVGG----LALISPQVLSSGHGA 308

Query: 318 IPTITNGGYGAGILLLLFVGRIFTTLLCFGSGAPGGIFAPMLALGTLFGYAFGLIAKMWF 377
           +    +       L  LF+ +   + +  GS   GG+F   L +G+L G  F L A  + 
Sbjct: 309 LHLNIDAELTIYGLAGLFMLKAAASAISIGSNFRGGLFFASLFMGSLLGKIFALCAP-YI 367

Query: 378 PELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTNNYH---LILPLIITS 427
              +  P ++A+ GM A  AA +  P+T   L +E+T ++    L+L  +IT+
Sbjct: 368 GYGSTAPIVYAVIGMSAFAAAIIGGPLTMTFLALELTGDFQITALVLAAVITT 420



 Score = 47.0 bits (110), Expect = 2e-09
 Identities = 50/201 (24%), Positives = 80/201 (39%), Gaps = 11/201 (5%)

Query: 246 ELSTLGLFLLLGALFGVFGVLFNYLITLAQDLFVKFHRNDRK----RYLLTGSMIGGCFG 301
           EL  + L +L+G   G+   L   L T    L     R        R +L G +IGG   
Sbjct: 31  ELGLVALAVLIGVAAGLLVALIGALSTALHILVFGVERLSSSDLSGRIVLFGPIIGGMLL 90

Query: 302 LLLLYVPELTGGGISLIPTITNGGYGAGILLLLFVGRIFTTLLCFGSGAPGGIFAPMLAL 361
            L++++   T     + P   N  +G  + L   +      ++  G GA  G+ A    +
Sbjct: 91  GLIIFILSKTRKKPMIDPIEANALHGGRLSLTDSIIVCVQNIVSNGFGASVGLEAGYTQI 150

Query: 362 GTLFGYAFGLIAKMWFPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEM---TNNYH 418
            +      G+  K+   ++ I  G     G     AA   AP+TG    IE+   T    
Sbjct: 151 ASGVASKIGIKLKLRRGDMRILVG----CGAAGAIAAAFNAPLTGAFYAIELIIGTYTVV 206

Query: 419 LILPLIITSLGAVIFAQLLGG 439
            + PLI+++L A     L+GG
Sbjct: 207 TLAPLIVSALVATTVIGLIGG 227