Pairwise Alignments

Query, 389 a.a., CAI-1 autoinducer synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 67.0 bits (162), Expect = 9e-16
 Identities = 86/357 (24%), Positives = 138/357 (38%), Gaps = 37/357 (10%)

Query: 49  YLALANHPLIKARLAKSLLEEQQSLFMSAS------FLQNDYDKPMIEKRLAKFTGFDEC 102
           YL L NHPLI     K++ EE ++L  S +       +  D +  + +   A+   +   
Sbjct: 66  YLGLDNHPLIIDGAIKAI-EEYRALHWSCARTRLNFAILRDLENSLSDLFQARVITYTTV 124

Query: 103 LLSQSGWNANVGLLQTICQPNTN------VYIDFFAHMSL--WEGARYANAQAHPFMHNN 154
           L       AN+G L  +   +        +  D  AH +L   +G      Q     HN+
Sbjct: 125 LA------ANMGALPIVASGHLTGGIRPMMVFDRHAHATLAFHKGTIALETQVRTLAHND 178

Query: 155 CDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNG 214
            D L  L + +     V D +YS +G  AP+ +L  +   +G  L +D++H +   G NG
Sbjct: 179 LDALEELCRSNRAVAYVCDGVYS-MGGNAPIRDLRYLQDRYGLFLYIDDAHGVSICGKNG 237

Query: 215 AGLLA-----ELGLTREVHFMTASLAKTFAYRAGAIWCNN-EVNRCVPFISYPAIFSSTL 268
            G +      ELG   E   + ASL K F    G +              +    FS++L
Sbjct: 238 EGFVRSQYGNELG---ERTIIAASLGKGFGASGGMLMLGTARQEELFRRFAVAHAFSASL 294

Query: 269 LPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQLGLTIRSESQIIGLET---GDE 325
                  +  +L I  S +  R+ L   A    I L    L        + + T   G E
Sbjct: 295 NVAAIGAVSGSLTIHRSDELLRRQL---ALSSNIALLDSMLVTEQSGAPLPIRTVNLGTE 351

Query: 326 RNTEKVRDYLESNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVN 382
                    L   G++GS    P  +K K  IR+ + SD   E+I  +    S+ ++
Sbjct: 352 ERAVNGTRALLDRGIYGSAIFFPTVAKGKAGIRVCVTSDHTPEEITGLCTALSEIMD 408