Pairwise Alignments

Query, 686 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., HAMP domain-containing histidine kinase from Rhodanobacter sp000427505 FW510-R12

 Score =  157 bits (398), Expect = 8e-43
 Identities = 114/419 (27%), Positives = 202/419 (48%), Gaps = 27/419 (6%)

Query: 13  QYAEPNLSLVGWMGMLGFPAYYFIWEYWFPQSYENLGLRCAAAVLFGGLVFRDSMPKKWQ 72
           Q AE  ++L+G + ++  P +Y ++   FPQ +ENL LR    +L   +V    +P KW+
Sbjct: 36  QVAENRMALLGALAVVAQPLFYVVFGILFPQPHENLWLRLVIVLLGLPIVLEPVIPPKWR 95

Query: 73  RYMPGYFLFTIGFCLPFFFAFMMLMNDWSTIWAMSFMASIFLHILLVHDTRVMALQALFS 132
           R++P Y+L  I   LP F  +M+LMN  S  W    +A+I L + ++ D R   L     
Sbjct: 96  RHLPIYWLLYITATLPLFSTYMLLMNGISAAWLAYQVAAIML-VFMLFDARAGLLSVFVG 154

Query: 133 VLVAYLA--VYGLTDFHPTTLIEWQYIPIFLFTYVFGNLCFFRNQISHETKVSIAKTFGA 190
             +  +   V+   + H  TL     + ++LF      +C     I+   +    ++  A
Sbjct: 155 CGLGVILDNVFHHAEIHYRTL--GPVVAVWLFAGAGAVICDLSRAIAWRVRTHSLQSVTA 212

Query: 191 GIAHEMRNPLSALK-TSIDVVRTMIPKPQTAAHTDYS---------LDAQELDLLHQILN 240
            I+HE+R PL++++  ++ + R     P+  A  D +         + A+ L ++ ++ +
Sbjct: 213 TISHELRTPLASIRLAALGLDRHF---PELIAGYDAAIAAGLIRPRMRARSLAVVRELAD 269

Query: 241 EADDVIYSGNNAIDLLLTSIDENRVSPASFKKHSVVDVIEKAVKTFPYKNAADQHSVELE 300
                       I++LL +      S  +  +      +  A   +PY ++A++  V + 
Sbjct: 270 TVSSEAEHAQVTIEMLLAA--AQATSQQAMGRVDAGATVSAAAARYPYGSSAERGRVHVA 327

Query: 301 VHQPFDFFGSDTLLTYALFNLLKNAFYY--QKEHFSVCISIEQT-SEHNLIRVRDNGVGI 357
           +   F FFG    LT  +FNLLKNA +Y  +K    + + +++       I V D G GI
Sbjct: 328 IKDNFCFFGWAPALTNVIFNLLKNAIHYTAKKSEAMIHVQVDRVEGGRGRITVFDTGTGI 387

Query: 358 APEMLEDIFRDFYTFGKN---GSYGLGLPFCRKVMSAFGGTIRCASQQGQWTEFVLSFP 413
           AP  L  +F + Y  GK+    + G+GL +C+ V+    GTI C+S +G +T FV++FP
Sbjct: 388 APSTLPRVF-ERYVSGKDRPETALGIGLAYCQDVVRKMSGTITCSSTEGIFTRFVITFP 445