Pairwise Alignments

Query, 686 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 917 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score = 99.8 bits (247), Expect = 5e-25
 Identities = 126/533 (23%), Positives = 212/533 (39%), Gaps = 61/533 (11%)

Query: 184 IAKTFGAGIAHEMRNPLSALKTSIDVVRTMIPKPQTAAHTDYSLDAQELDLLHQILNEAD 243
           I   F A ++HE+R PL+ +     +++               L  ++LD L  I   AD
Sbjct: 284 IKSEFLANMSHEIRTPLNGILGFTHLLQKS------------ELTPRQLDYLGTIEKSAD 331

Query: 244 DVIYSGNNAIDLLLTSIDENRVSPASFKKHSVVDVIEKAVKTFPYKNAADQHSVELEV-- 301
           +++   N  +D   + I+  ++   S    ++ D+++  +       A   H+ +LE+  
Sbjct: 332 NLLGIINEILDF--SKIEAGKLVLDSIP-FNLRDLLQDTLTIL----APAAHAKQLELVS 384

Query: 302 ----HQPFDFFGSDTLLTYALFNLLKNAFYYQKEHFSVCIS-IEQTSEHNL---IRVRDN 353
                 P    G    L   L NL+ NA  + +E   V  + IE   E ++   I V+D 
Sbjct: 385 LVYRDTPLALVGDPLRLKQILTNLISNAIKFTREGTIVARAMIEDEQEDSVQLRISVQDT 444

Query: 354 GVGIAPEMLEDIFRDFYTFGKN-----GSYGLGLPFCRKVMSAFGGTIRCASQQGQWTEF 408
           G+G++ + +  +F+ F     +     G  GLGL   ++++   GG I   S  G+ +EF
Sbjct: 445 GIGLSSQDVRALFQAFSQADNSLSRQPGGTGLGLVISKRLIEQMGGEIGVDSTPGEGSEF 504

Query: 409 VLSF--PRYDSDTVNEIKTELLKTKSLIYIGSNQAIVRELNQLAVED------EFGFTAI 460
            +S   P+   D  +     LL  +  + +  N  + R+  Q  +ED       F     
Sbjct: 505 WISLNLPKTRDDVEDLPSAPLLGHR--VAVLENHELARQALQHQLEDCGLEVTPFNSLES 562

Query: 461 SAQQAVRRQDYEFEFDLILLDLDDATAQGELLPKLEGTLSFAEGCIGYVYDPGKTYAV-- 518
                      E   DL +L +       E L +    L    GC   V  P     +  
Sbjct: 563 LTNGITSAHQTEQAIDLAVLGVTANDIPPERLNQHLWDLEHL-GCKVLVLCPTTEQMLFN 621

Query: 519 ----NINRYLRIQPISIHSILRKPRKIIERLLFEQESLSMNRNVIPLQKSRHERRILVVD 574
               N N  L+ +P    +  RK R+ +  L+  + S S     +    S    R+L VD
Sbjct: 622 QSVPNPNSQLQAKP----ACTRKLRRALSDLISPRPSRSEPGEPL----SSRAPRVLCVD 673

Query: 575 DNQSIRTFTAILLEQQGYEVVQANDGSEVLKHMESQNIDLVLMDIEMPNVGGLEATRLIR 634
           DN +       LLE  G  V     G   +  ++    DLVLMD++MP + G ++T  IR
Sbjct: 674 DNPANLLLVQTLLEDMGARVRAVESGYAAIDAVKQDTFDLVLMDVQMPGMDGRQSTEAIR 733

Query: 635 NSEHEYKN--IPIIGYTGDNSPKTLALVQTSGMNDFIVKPADRDVLLNKVAAW 685
             E E     +P++  T          +  SGM+D++ KP     L   V  W
Sbjct: 734 QWESERSGTPLPVVALTAHAMANEKRALLQSGMDDYLTKPISERQLAQVVLKW 786