Pairwise Alignments

Query, 686 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 769 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  108 bits (271), Expect = 7e-28
 Identities = 127/509 (24%), Positives = 213/509 (41%), Gaps = 45/509 (8%)

Query: 188 FGAGIAHEMRNPLSALKTSIDVVRTMIPKPQTAAHTDYSLDAQELDLLHQILNEADDVIY 247
           F A ++HE+R PL+ L   I            A   D  L+A++   L    +    ++ 
Sbjct: 290 FLANMSHEIRTPLNGLLGMI------------ALSLDSPLNAEQRQQLSIAHDSGKVLVE 337

Query: 248 SGNNAIDLLLTSIDENRVSPASFKKHSVVDVIEKAVKTFPYKNAADQHSVEL----EVHQ 303
             N+ +DL      +  +    F   S+V+     +     +NAA   SVEL    +   
Sbjct: 338 LLNDILDLSKFDAGQLELERIPFDLGSLVEDTANLLS----QNAAP--SVELTCLIDPQF 391

Query: 304 PFDFFGSDTLLTYALFNLLKNAFYYQKEHFSVCISIEQTSEHNLIRVRDNGVGIAPEMLE 363
           P    G  T +   + NLL NA  + +    V + +        I V D G+GIA E   
Sbjct: 392 PAQVLGDPTRVRQIVSNLLSNALKFTR-FGRVDVRLSAHEGQVRIEVCDTGIGIAQEAQV 450

Query: 364 DIFRDFYTFGKN-----GSYGLGLPFCRKVMSAFGGTIRCASQQGQWTEFVLSFPRYDSD 418
            IF+ F   G       G  GLGL     +  A  G +  +S+ G  ++F    P     
Sbjct: 451 KIFQPFTQAGAGITRQFGGTGLGLALTHNLCEAMKGRLSISSEVGFGSQFCADLPL--PT 508

Query: 419 TVNEIKTELLKTKSLIYIGSNQAIVRELNQLAVEDEFGFTAISAQQAVRRQDYEFEF-DL 477
            +  I+   LK + +    +   +   L  L     +G T    +   R +D   +  DL
Sbjct: 509 HLPAIQPAPLKGEVIAITSTGSGLTELLTTLL--PHWGLTP---RCYPRDEDLSGQTPDL 563

Query: 478 ILLDLDDATAQGELLPKLEGTLSFAEGCIGYVYDPGKTYAVNINRYLRIQPISIHSILRK 537
           ++ D  +   +  L P +   +        ++  P +  A       + +P+S +++ + 
Sbjct: 564 LITDCPECLFR--LRPTITAPILVVTAYGNFM--PSEEVAALAPLQQQARPLSRNALYQ- 618

Query: 538 PRKIIERLLFEQESLSMNRNVIPLQKSRHERRILVVDDNQSIRTFTAILLEQQGYEVVQA 597
              I++R L     L ++   +      H  RIL+V+DN   +     +L + G EV+ A
Sbjct: 619 ---ILQRNLRSDAQLILDPIQMETAPLVHRARILLVEDNPVNQLVAKGMLSKLGCEVIVA 675

Query: 598 NDGSEVLKHMESQNIDLVLMDIEMPNVGGLEATRLIRNSEHEYKNIPIIGYTGDNSPKTL 657
             G E LK +E Q+ DLVLMD  MP + G EA+R IR S   + ++PI+  T +   +  
Sbjct: 676 AHGGEALKFLEEQHFDLVLMDCNMPVMDGYEASRQIRRS-GRWPDLPIVALTANALSEER 734

Query: 658 ALVQTSGMNDFIVKPADRDVLLNKVAAWV 686
              + +GMND++ KP  R+ L   +  WV
Sbjct: 735 ERCRAAGMNDYLAKPFRREELSGLLELWV 763