Pairwise Alignments

Query, 686 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

 Score =  110 bits (275), Expect = 3e-28
 Identities = 115/515 (22%), Positives = 224/515 (43%), Gaps = 36/515 (6%)

Query: 184 IAKTFGAGIAHEMRNPLSALKTSIDVVRTMIPKPQTAAHTDYSLDAQELDLLHQILNEAD 243
           +   F A ++HE+R PL+ +   I   R M+    T +  DY         L  I   A+
Sbjct: 290 VKSEFLANMSHELRTPLNGV---IGFTRQMLKTQLTNSQADY---------LQTIEKSAN 337

Query: 244 DVIYSGNNAIDLLLTSIDENRVSPASFKKHSVVDVIEKAVKTFPYKNAADQHSVELEVHQ 303
           +++   N+ +D       +  +    F+   V++ +     T  ++   +  +++++   
Sbjct: 338 NLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEI-TLKIDPKI 396

Query: 304 PFDFFGSDTLLTYALFNLLKNAFYYQKEHFSVCISIEQTSEHNLI-----RVRDNGVGIA 358
           P    G    +   L NL+ N+  +  E  ++ +S+E  +  + +      VRD G+GI+
Sbjct: 397 PRGVVGDPLRIQQVLTNLVGNSIKFT-ERGNIDVSVEMRALRDDVIDLQFMVRDTGIGIS 455

Query: 359 PEMLEDIFRDFYTFGKN-----GSYGLGLPFCRKVMSAFGGTIRCASQ--QGQWTEFVLS 411
                 +F+ F     +     G  GLGL   +K++S  GG I   S+  QG    F L 
Sbjct: 456 ERQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLR 515

Query: 412 FPRYDSDTVNEIKTELLKTKSLIYIGSNQAIVRELNQLAVEDEFGFTAISAQQAVRRQDY 471
               +    +    + L  + L+ I  N      + Q  V+     T  SA       + 
Sbjct: 516 LHTTELPLNDGYNADSLNHRHLLLIEPNMQAAAIVQQTLVQSGLEVTYRSAIP-----EE 570

Query: 472 EFEFDLILLDLDDATAQGELLPKLEGTLSFAEGCIGYVYDPGKTYAVNINRYLRIQPISI 531
           +  +D +LL+L  +      L +L    + A      V  P    A+  ++ ++  P+  
Sbjct: 571 QHVYDYVLLNLAPSKETNPTLVELWVQRALAMTHNVIVGVPSTELAL-ADQLMQRYPVKC 629

Query: 532 HSILRKPRKIIERLLFEQESLSMNRNVIPLQKSRHERRILVVDDNQS-IRTFTAILLEQQ 590
            S     +K+++ L  +Q  L+ N ++   Q  +    ++ VDDN + ++  TA+L E+ 
Sbjct: 630 ISKPLSRKKLLQTLAAQQPQLA-NTSLPKPQADKLPLCVMAVDDNPANLKLITALLQERV 688

Query: 591 GYEVVQANDGSEVLKHMESQNIDLVLMDIEMPNVGGLEATRLIRNSEHEYKNIPIIGYTG 650
            Y VV    G E ++  +S+  D++LMDI+MP++ G+ A + I+  +  Y++ P+I  T 
Sbjct: 689 EY-VVSCTSGQEAIEQAQSRQFDIILMDIQMPHMDGVTACKAIKQLK-GYRDTPVIAVTA 746

Query: 651 DNSPKTLALVQTSGMNDFIVKPADRDVLLNKVAAW 685
                    +  +GM+D++ KP +  +L   +  W
Sbjct: 747 HAMAGERDRLLKAGMDDYLTKPIEEHILQQVLVHW 781