Pairwise Alignments

Query, 686 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1143 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score = 95.5 bits (236), Expect = 1e-23
 Identities = 123/502 (24%), Positives = 201/502 (40%), Gaps = 55/502 (10%)

Query: 188 FGAGIAHEMRNPLSALKTSIDVVRTMIPKPQTAAHTDYSLDAQELDLLHQILNEADDVIY 247
           F A ++HE+R PL++L         +I       + D +L   ++     I +  +D++ 
Sbjct: 477 FLANMSHELRTPLNSL---------LILSKLLGDNPDGNLSDDQVKFARTIESSGNDLLT 527

Query: 248 SGNNAIDLLLTSIDENRVSPASFKKHSVVDVIEKAVKTFPYKNAADQHSVELEVH----Q 303
             N+ +DL        ++ P +     ++  I        ++  AD  ++ LE+      
Sbjct: 528 LINDILDLSKIEAGHVQIQPETVSVQRLIGDIRHL-----FQPVADDRALALEIELAEGS 582

Query: 304 PFDFFGSDTLLTYALFNLLKNAFYYQKEHFSVCISIEQTSEHNL-IRVRDNGVGIAPEML 362
           P         +   L NLL NAF +  E  SV + I    E  L + V D G+GI+P+  
Sbjct: 583 PVAIETDRMRVEQILKNLLSNAFKFT-EKGSVRLEIAPAGEEGLSLAVTDTGIGISPDQQ 641

Query: 363 EDIFRDFYTFG-----KNGSYGLGLPFCRKVMSAFGGTIRCASQQGQWTEFVLSFPR-YD 416
             IF  F         K G  GLGL   R++    GG I   S+ GQ + F L  PR YD
Sbjct: 642 RSIFEAFQQADGTISRKFGGTGLGLSISRELARLLGGAISLQSEPGQGSTFTLVIPRAYD 701

Query: 417 SDTVNEIKTELLKTKSLIYIGSNQAIVRELNQLA----VEDEFGFTAISAQQAVRRQDYE 472
              V     E  +      + S  A+      +A    VED+ G  A   +  +  +D +
Sbjct: 702 PSRV--APRETARPMPAASVSSAPAVPARPASIAPGWSVEDDRGAIADGRRLLLVIED-D 758

Query: 473 FEFDLILLDLD-DATAQGELLPKLEGTLSFAEGC--------IGYVYDPGKTYAVNINRY 523
             F  I+ DL  +   Q  +    E  +S A+          +G     G T    +   
Sbjct: 759 TVFASIVRDLSRELDFQCIVAGTAEEAVSLAQQFRPSAIVLDLGLPDQSGLTVLDRLKHD 818

Query: 524 LRIQPISIHSILRKPRKIIERLL---------FEQESLSMNRNVIPLQKSRHERRILVVD 574
              + I IH I           L          ++E L+     +  + +   RR+L+V+
Sbjct: 819 DETRHIPIHVISAADHSQTALSLGAAGYLLKPVKREQLAEVLTGLQEKLAARMRRVLIVE 878

Query: 575 DNQSIRTFTAILLEQQGYEVVQANDGSEVLKHMESQNIDLVLMDIEMPNVGGLEATR-LI 633
           D+   R   A LL+    E+V     +E L+ +  Q  D +++D+ +P+  G E    L 
Sbjct: 879 DDPVQRDAVAQLLKSNAVEIVGVGTAAECLQALREQTYDCMVLDLTLPDASGFELLETLS 938

Query: 634 RNSEHEYKNIPIIGYTG-DNSP 654
           R  +H +   P+I YTG D SP
Sbjct: 939 REGDHGFP--PVIVYTGHDLSP 958



 Score = 84.3 bits (207), Expect = 3e-20
 Identities = 89/270 (32%), Positives = 130/270 (48%), Gaps = 38/270 (14%)

Query: 441  AIVRELNQLAVEDEFGFTAISAQQAVRRQDYEFEFDLILLDLDDATAQG-ELLPKL--EG 497
            A+ + L   AVE     TA    QA+R Q Y    D ++LDL    A G ELL  L  EG
Sbjct: 886  AVAQLLKSNAVEIVGVGTAAECLQALREQTY----DCMVLDLTLPDASGFELLETLSREG 941

Query: 498  TLSFAEGCIGYVYDPGKTYAVNINRYLRIQPISIHSILRKPRKIIERLLFEQESLSMNRN 557
               F    +   +D        + RY        +SI+ K  K  ERLL ++ SL +++ 
Sbjct: 942  DHGFPPVIVYTGHDLSPDDEQRLRRYS-------NSIIIKGAKSPERLL-DEVSLFLHQV 993

Query: 558  VIPL--------QKSRHE------RRILVVDDN-QSIRTFTAILLEQQGYEVVQANDGSE 602
            V  L        QK+RH       RRIL+V+D+ +++ + T+IL E +G  V  A +G E
Sbjct: 994  VSELPPEQRRMIQKARHRDAALEGRRILIVEDDVRNVYSLTSIL-EPRGAVVQIARNGRE 1052

Query: 603  VLKHMES------QNIDLVLMDIEMPNVGGLEATRLIRNSEHEYKNIPIIGYTGDNSPKT 656
             L  + +      + IDLVLMD+ MP + GL AT  IR  +  +  +P++  T    P  
Sbjct: 1053 ALDALAASLDDPARTIDLVLMDVMMPVMDGLTATGEIRR-DPRWAKLPVVMLTAKAMPDD 1111

Query: 657  LALVQTSGMNDFIVKPADRDVLLNKVAAWV 686
                  +G ND++ KP D D LL+ V  W+
Sbjct: 1112 QQRCLEAGANDYMAKPIDVDKLLSLVRVWM 1141