Pairwise Alignments

Query, 686 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 947 a.a., Hybrid sensory histidine kinase from Sphingobium sp. HT1-2

 Score =  104 bits (260), Expect = 2e-26
 Identities = 153/682 (22%), Positives = 264/682 (38%), Gaps = 126/682 (18%)

Query: 88  PFFFAFMMLMNDWSTIWAMSFMASIFLHILLVHDTRVMALQ---ALFSVLVAYLAVY--- 141
           P    F++  + W     M F A + L I       ++A     AL  +L+ YL  Y   
Sbjct: 77  PAILLFLLRGHAWQMDMHMYFFAMLALTIAWCDKRAILAAATATALHHLLLLYLLPYAVF 136

Query: 142 -------------GLTDFHPTTLIEW---QYIPIFLFTYVFGNLCFFRNQI-----SHET 180
                        G+  F    L+ W   + +  F      G     +NQ          
Sbjct: 137 PGQGNLERVLLHAGIVAFQTAVLV-WLSDKLVESFQRNQKMGEEILAKNQALEARTREAE 195

Query: 181 KVSIAKT-FGAGIAHEMRNPLSALKTSIDVVRTMIPKPQTAAHTDYSLDAQELDLLHQIL 239
           + + AK+ F A ++HE+R P++A+     +V          A TD  LD ++ D + +I 
Sbjct: 196 EANRAKSLFLANMSHEIRTPMNAILGFCHLV----------ARTD--LDPKQQDYIGKIN 243

Query: 240 NEADDVIYSGNNAIDLLLTSIDENRVSPASFKKH--SVVDVIEKAVKTFPYKNAADQHSV 297
                ++   N+ +D       +N     + + H  ++   IE  ++       A Q  V
Sbjct: 244 QAGVSLLRLINDILDF-----SKNEAGKLTLEAHPFTLRSAIENQIQLVAANAEAKQVRV 298

Query: 298 --ELEVHQPFDFFGSDTLLTYALFNLLKNAFYYQKEHFSVCISIEQTSEHNLIR----VR 351
              ++   P    G +      + NL+ NA  + +E  +V I +  + ++  +R    VR
Sbjct: 299 VSRVDADVPERLIGDEMRFCQVVLNLMSNAVKFSEEG-TVTIGLSASEQNGRVRLKLTVR 357

Query: 352 DNGVGIAPEMLEDIFRDFY-----TFGKNGSYGLGLPFCRKVMSAFGGTIRCASQQGQWT 406
           D G+G+ PE  + +F  F      T  + G  GLGL  CR+++   GG I   S  GQ +
Sbjct: 358 DTGIGMTPEQQKSLFHSFTQADSSTTRRFGGTGLGLAICRQIVEQMGGDIAVESAPGQGS 417

Query: 407 EFVLSFPRYDSDTVNEIKTELLKTKSLIYIGSNQAIVRELNQLAVEDEFGFTAI------ 460
            F+        D    ++  +             A VR L  LA +D      I      
Sbjct: 418 SFICHMLMDADDRAMGLEMPM------------SAHVRRLRVLAADDNPASRQIIHDVFA 465

Query: 461 -------------SAQQAVRRQDYEFE-FDLILLDLDDATAQGELLPKLEGTLSFAEGCI 506
                         A  A+   D   E +DL LLD          +P L+G +   +   
Sbjct: 466 GWGMAVDLVASGGEAIAAIEHADERGEPYDLALLDWK--------MPGLDG-METVDALR 516

Query: 507 GYVYDPGKTYAVNINRY------LRIQPISIHSILRKPRKIIERLL-------FEQE--- 550
                  +  A+ I  Y        +    + + L KP  ++ ++L       F +E   
Sbjct: 517 ATALRHPQPKALIITAYGADDLLQGVDTDKVAAFLTKP--VVPKILLDTITEIFAEEHAP 574

Query: 551 ----SLSMNRNVIPLQKSRHERRILVVDDNQSIRTFTAILLEQQGYEVVQANDGSEVLKH 606
               + S    +  + ++    R+L+V+DN+  R   A LL+  G +V  A +G      
Sbjct: 575 VVHVAASATPALPMVAEALRGLRVLLVEDNEINREIAAELLDDAGLKVDFAENGRIACDM 634

Query: 607 MESQNID--LVLMDIEMPNVGGLEATRLIRNSEHEYKNIPIIGYTGDNSPKTLALVQTSG 664
           +  +      VLMD++MP + G+ ATR+IR  +   +++PII  T     +     + +G
Sbjct: 635 VREKGAGYAAVLMDVQMPEMDGISATRIIR-EQWNAEDLPIIAMTAHAYEEEKQRCKAAG 693

Query: 665 MNDFIVKPADRDVLLNKVAAWV 686
           MND I KP +  VL+  +  W+
Sbjct: 694 MNDHIAKPVEPPVLVRVLDRWL 715