Pairwise Alignments

Query, 686 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 825 a.a., Sensory box histidine kinase/response regulator from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  263 bits (671), Expect = 3e-74
 Identities = 204/705 (28%), Positives = 331/705 (46%), Gaps = 55/705 (7%)

Query: 10  RVYQYAEPNLSL-VGWMGMLGFPAYYFIWEYWFPQSYENLGLRCAAAVLFGGLVFRDSMP 68
           R Y   +P + L  G +G + +P +Y +        Y++L LR  A      L+ R   P
Sbjct: 13  RQYHEGDPQMLLYAGLLGTVAYPLFYLLRFAKNEPVYDDLALRSLAFAASLLLLLRYRWP 72

Query: 69  KKWQRYMPGYFLFTIGFCLPFFFAFMMLMNDWSTIWAMSFMASIFLHILLVHDTRVMALQ 128
           +    Y   Y   T+   LPFFF F  L N        + + ++F  ++L+ D R M L 
Sbjct: 73  RSLVPYFFPYSWVTVTLTLPFFFVFTSLKNGGGPAAVGNTLMAVFF-VMLITDRRNMILM 131

Query: 129 ALFSVLVAYLAVYGLTDFHPTTLIEW-QYIPIFLFTYVFGNLCFFRNQISHETKVSIAKT 187
            L     A+  VY +TD +PT   ++   +PI L T V G+L  F+  +   T   + + 
Sbjct: 132 LLIGFSAAF-GVYWVTDPNPTLPYDYVARVPILLLTLVGGSL--FKLCVERSTAERVRQA 188

Query: 188 FGA---GIAHEMRNPLSALKTSIDVVRTMIPKPQTAAHTDYSLDAQELDLLHQILNEADD 244
           + +    IAHEMRNPL  LK +++ +  ++P P T A  D  L  ++ D L++ + + + 
Sbjct: 189 YASLAGSIAHEMRNPLGQLKYTLENIEKVLPPPTTKAQ-DQVLTQEDQDALYRHIAQGEL 247

Query: 245 VIYSGNNAIDLLLTSIDENRVSPASFKKHSVVDVIEKAVKTFPYKNAADQHSVELEVHQP 304
            +  G   + + L  + +  +   SF   S  D   KAV+ F Y++A+ +  V L V + 
Sbjct: 248 SVQRGLQVVSMTLDEVHQKPLRSDSFMLLSAGDSCRKAVEEFGYEDASHRERVSLHVERD 307

Query: 305 FDFFGSDTLLTYALFNLLKNAFYYQKEHFSVCISIEQTSEHNLIRVRDNGVGIAPEMLED 364
           F F G +T   + LFNL+KNA  Y +    +CI+++       +RV DNG GI P +LE 
Sbjct: 308 FVFHGDETAFLFVLFNLIKNALAYPQ--LQLCITVDDQQ----VRVSDNGPGIPPAVLER 361

Query: 365 IFRDFYTFGKNGSYGLGLPFCRKVMSAFGGTIRCASQQGQWTEFVLSFPRYDSDTVNEIK 424
           +F+ F+T GK G  GLGL +C++VM AFGG I C S  G+ T F L FP      V   +
Sbjct: 362 LFQPFHTSGKKGGTGLGLSYCQRVMQAFGGRISCLSVLGESTCFTLEFP-----PVTAAE 416

Query: 425 TELLKTKSLIYIGSNQAIVRELNQLAVEDEFGFTAISAQQAVRR-------QDYE----- 472
           +E L+  +L+     + ++     L V+D+     ++ Q+ V          D E     
Sbjct: 417 SEALRNATLL---EARGLLESRRVLVVDDQTMLRTVTRQRLVSTGATVDECADGEQALSM 473

Query: 473 ---FEFDLILLDLDDATAQGELLPKL----EGTLSFAEGCIGYVYDPGKTYAVNINRYLR 525
                +DL++LDL+     G  + KL       +  +   + +  +P     V      +
Sbjct: 474 LARTHYDLMVLDLNMPGLDGYEVVKLIRAGHPGIDRSLRIVAHSSEPASVARV------K 527

Query: 526 IQPISIHSILRKPRK---IIERLLFEQESLSMNRNVIPLQKSRHERRILVVDDNQSIRTF 582
            +   +   + KP +   ++  L    ++ S       LQ +   R +L+ DD    R  
Sbjct: 528 TRKAGMDGFVPKPCEQSVLLHALCRALQTASATDMDGALQIA--GRSVLLADDIAFNRKA 585

Query: 583 TAILLEQQGYEVVQANDGSEVLKHMESQ-NIDLVLMDIEMPNVGGLEATRLIRNSEHEYK 641
            A  L   G  V +A  G E L  +ES  + D +L+DIEMP + GLE    IR S    +
Sbjct: 586 VATYLRHAGVVVTEAGSGQEALALLESMAHCDAILLDIEMPGMNGLEVASAIRASGMACR 645

Query: 642 NIPIIGYTGDNSPKTLALVQTSGMNDFIVKPADRDVLLNKVAAWV 686
           N PI+  T  +    +A+ + +GM+D +VKP D   L +K+  W+
Sbjct: 646 NAPIVALTAHSGADMVAMARKAGMSDLLVKPVDMTSLYSKLREWL 690