Pairwise Alignments

Query, 686 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 730 a.a., sensory box histidine kinase/response regulator from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  208 bits (530), Expect = 6e-58
 Identities = 160/551 (29%), Positives = 252/551 (45%), Gaps = 35/551 (6%)

Query: 154 WQYIPIFLFTYVFGNLCFFRNQISHETKVSIAKTFGAGIAHEMRNPLSALKTSIDVVRTM 213
           W   P  LF  V G L     + +   +  +  +F   IAHEMR P+  ++   D +   
Sbjct: 50  WLPAPTLLF--VAGALSHLGEKQARLARHRLYMSFAGSIAHEMRGPMQKIQHVFDTLDRD 107

Query: 214 IPKPQTAAHTDYSLDAQELDLLHQILNEADDVIYSGNNAIDLLLTSIDENRVSPASFKKH 273
             +    + T  S   +++  + ++LNE  + I  G  ++ + L  +     + +SF   
Sbjct: 108 FMR-MGPSETSVSHSREQILKMARVLNEGRNAIKLGLQSVTVTLQQLKTKAFNTSSFTCL 166

Query: 274 SVVDVIEKAVKTFPYKNAADQHSVELEVHQPFDFFGSDTLLTYALFNLLKNAFYYQKEHF 333
           S     E+AV  F Y++ A +  V LE    F F G +T+LT  LFNL+KNA YY     
Sbjct: 167 SAGACTERAVSEFGYESDAQRDRVRLEEVADFMFKGDETVLTLILFNLIKNALYYLSAFP 226

Query: 334 SVCISIEQTSEHNLIRVRDNGVGIAPEMLEDIFRDFYTFGKNGSYGLGLPFCRKVMSAFG 393
              +++  T E   I VRD G GIAP+ +E +F DF T GK    GLGL FCR+ M AFG
Sbjct: 227 QATVTV--TVEARRITVRDTGPGIAPDRMERLFEDFQTSGKAEGTGLGLAFCRRAMRAFG 284

Query: 394 GTIRCASQQGQWTEFVLSFPRYDSDTVNEIKTELLKTKSLIYIGSNQAIV---------- 443
           G I C SQ G++T+F LSFP      +   + E L+  + +  G+   +V          
Sbjct: 285 GEITCESQLGEFTQFTLSFPAVPPAELQAHEEESLRHAARLLRGARVLLVDDEPLQRRST 344

Query: 444 -RELNQLAVEDEFGFTAISAQQAVRRQDYEFEFDLILLDLDDATAQGELLPKLEGTLSFA 502
             +L  L            AQ     +     +DL+++D+D     G      E      
Sbjct: 345 LAKLLSLVGSSSIDEAVDGAQALDLLRSASVPYDLVVMDIDMPVLNG-----YEAVRQIR 399

Query: 503 EGCI-GYVYDPGKTYAVN--INRYLRIQPISIHSILRKPRKI------IERLLFEQESLS 553
            G + G+   P   Y+         R +   +   LRKP  +      I  LL +Q   +
Sbjct: 400 LGEVPGHEQVPVLAYSAQAAAKARARARDAGMDGFLRKPCGLADLAGAIVNLLKDQPWHA 459

Query: 554 MNRNVIPLQKSRHERRILVVDDNQSIRTFTAILLEQQGYEVVQANDGSEVLKHMES-QNI 612
             ++  P       R +L+ +DN   R      LE  G EV++A  G EVL+ + +    
Sbjct: 460 SAKDPAPFT----GRTVLLAEDNAVNRAIVKGYLETLGLEVIEAQHGQEVLECLRAGARP 515

Query: 613 DLVLMDIEMPNVGGLEATRLIRNSEHEYKNIPIIGYTGDNSPKTLALVQTSGMNDFIVKP 672
            ++LMD+EMP + G+EATR +R      +NIP++  TG +S + +   + +GM+ F+ KP
Sbjct: 516 AVILMDVEMPVLSGMEATRQLRTMPDGVRNIPVVALTGHSSAEDMQAARDAGMDGFLSKP 575

Query: 673 ADRDVLLNKVA 683
            +   L  ++A
Sbjct: 576 VNVVALRKELA 586