Pairwise Alignments

Query, 686 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 890 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score = 92.0 bits (227), Expect = 1e-22
 Identities = 131/542 (24%), Positives = 216/542 (39%), Gaps = 85/542 (15%)

Query: 188 FGAGIAHEMRNPLSALKTSIDVVRTMIPKPQTAAHTDYSLDAQELDLLHQILNEADDVIY 247
           F A ++HE+R P++ +               T    D  LD ++      I + A+ ++ 
Sbjct: 259 FLATMSHEIRTPMNGVIG------------MTGLLLDTQLDPEQRHFATTIRDSAESLLT 306

Query: 248 SGNNAIDLLLTSIDENRVSPASFKKHSVVDVIEKAVKTFPYKNAADQHSVELEVHQPFDF 307
             N+ +D       +  +    F+   +V+ I   +    +    +  S+ ++   P   
Sbjct: 307 VINDILDFSKLEAGKLDLESTDFELVGLVESIVDILAPRAHAKGIEIASM-VDPDLPAWV 365

Query: 308 FGSDTLLTYALFNLLKNAFYYQKEHFSVCISI-EQTSEHNLIR----VRDNGVGIAPEML 362
            G    L   L NL  NA  +   H  + I + ++TS     R    VRD G+GI  + +
Sbjct: 366 RGDPGRLRQILMNLAGNAIKFTS-HGGISIEVRDETSPDGAGRLRFDVRDTGIGIPQDAI 424

Query: 363 EDIFRDFY-----TFGKNGSYGLGLPFCRKVMSAFGGTIRCASQQGQWTEFVLSFPRYDS 417
             +F  F      T  + G  GLGL   +++    GGTI   S  G  + F  S P    
Sbjct: 425 GRLFSMFMQVDASTARRYGGTGLGLAISKRLTEMMGGTIGVESTPGAGSLFWFSLPFQMV 484

Query: 418 DTVNEIKTELLKTKSLIYIGSNQAIVRELNQLAVEDEF-GFTAISAQQAVRRQDYEFEFD 476
           +T    + +L   + L+   S       +N+  +E +  GF  I A  A           
Sbjct: 485 ETAPPQRPDLAGRRILVVDDS------PINRDVLERQLRGFGVIVASCA----------- 527

Query: 477 LILLDLDDATAQGELLPKLEGTLSFAEGCIGYVYDPGKTYAVNINRYLRIQPIS------ 530
               D + A A+   L +   T +  E  I     PG T +  I R +R +P+       
Sbjct: 528 ----DAESALAE---LGRAAATGTPWEAAIIDARMPGVTGSDLIGR-IRAEPVLAPMGLI 579

Query: 531 -------------------IHSILRKPR--KIIERLLFE------QESLSMNRNVIPLQK 563
                              IH  LR+     ++ R+L        Q+S       IP   
Sbjct: 580 IASSQGLSPEDGSPKADAFIHKPLRRQTILAVLARVLGLPHDPGLQDSPESEPEAIPRPA 639

Query: 564 SRHERRILVVDDNQSIRTFTAILLEQQGYEVVQANDGSEVLKHMESQNIDLVLMDIEMPN 623
            R   RILV +DN   +     LL + G+ V  A DG+E ++ + S+  DLVLMD++MP 
Sbjct: 640 RR--LRILVAEDNPVNQQVAVGLLRKLGHSVDVAADGAEAVEAVRSRPYDLVLMDVQMPE 697

Query: 624 VGGLEATRLIRNSEHEYKNIPIIGYTGDNSPKTLALVQTSGMNDFIVKPADRDVLLNKVA 683
           + GL+AT  IR      + +PI+  T +       +   +GM+ +I KP DR  L+  +A
Sbjct: 698 MDGLQATAAIRALTGGAERVPIVAMTANAMRGDDRMCLDAGMDRYISKPIDRRKLMEVLA 757

Query: 684 AW 685
            +
Sbjct: 758 QY 759