Pairwise Alignments

Query, 686 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 954 a.a., two-component system sensor histidine kinase RcsC from Dickeya dianthicola ME23

 Score =  105 bits (261), Expect = 1e-26
 Identities = 121/497 (24%), Positives = 198/497 (39%), Gaps = 41/497 (8%)

Query: 188 FGAGIAHEMRNPLSALKTSIDVVRTMIPKPQTAAHTDYSLDAQELDLLHQILNEADDVIY 247
           F A ++HE+R PL  +  ++D+++T +            L +    L+  + N +  ++ 
Sbjct: 474 FLATVSHELRTPLYGIIGNLDLLQTKL------------LPSDANRLVTAMQNSSSLLLK 521

Query: 248 SGNNAIDLLLTSIDENRVSPASFKKHSVVDVIEKAVKTFPYKNAADQHSVELEVHQPFDF 307
             ++ +D      ++ ++ P+ F    V++ I         K     +   ++   PF  
Sbjct: 522 IISDILDFSKIESEQLKIEPSEFAPREVINHIVSNYLPLVVKKRLVLYCY-IDPDVPFRL 580

Query: 308 FGSDTLLTYALFNLLKNAFYYQKEHFSVCISIEQTSEHNLIRVRDNGVGIAPEMLEDIFR 367
            G    L   L NLL NA  +      V         + + +VRD GVGI    +  +F 
Sbjct: 581 MGDAVRLQQVLSNLLSNAIKFTDTGCIVFQVACCDDGYLVFKVRDTGVGIDTRAVMKLFD 640

Query: 368 DFYTFGKN-----GSYGLGLPFCRKVMSAFGGTIRCASQQGQWTEFVLSFPRYDSDTVNE 422
            F+  G          GLGL  C K++S   G I   S+ G  +EF +  P Y +     
Sbjct: 641 PFFQAGTGVQRHFQGTGLGLAICEKLVSLMDGDITIESELGLGSEFGIRIPLYRAHYPQT 700

Query: 423 IKTELLKTKSLIYIGSNQAIVRELNQLAVEDEFGFTAISAQQAVRRQDYEFEFDLILLDL 482
           +    L+ K+      N  + R L  L              Q V R D    FD +   L
Sbjct: 701 LPVPDLQGKTYWLQIRNALMERYLLGLLNTGGLDAQRYEEGQPVGRDDVMI-FDHVPDTL 759

Query: 483 DDATAQGELLPKLEGTLSFAEGCIGY-VYDPGKTYAVNINRYLRIQPISIHSILRKPRKI 541
            +A A  E+     G     E   GY +Y     + +         P+ +  I R   ++
Sbjct: 760 PNAYAWVEISGMQAGAAQ--EIRTGYWLYSTAALHEL---------PVLLQRIYRGEDEL 808

Query: 542 IERLLFEQESLSMNRNVIPLQKSRHERRILVVDDNQSIRTFTAILLEQQGYEVVQANDGS 601
               L    S+S NR            R+LVVDD+   R   A  L   GY+VV ANDG 
Sbjct: 809 PTAAL-SLPSVSYNRT------ENGGIRLLVVDDHPINRRLLADQLGSLGYQVVTANDGL 861

Query: 602 EVLKHMESQNIDLVLMDIEMPNVGGLEATRLIRNSEHEYKNIPIIGYTGDNSPKTLALVQ 661
           + L  +    +D+VL D+ MPN+ G   T+ +R      + +P+IG T +   +      
Sbjct: 862 DALDVLAKNPVDIVLTDVNMPNMDGYRFTQRLREMG---QTLPVIGVTANALAEERQRCL 918

Query: 662 TSGMNDFIVKPADRDVL 678
            +GM++ + KP   D L
Sbjct: 919 QAGMDNCLSKPVTLDTL 935