Pairwise Alignments

Query, 1013 a.a., nuclease SbcCD subunit C from Vibrio cholerae E7946 ATCC 55056

Subject, 814 a.a., Chromosome partition protein smc from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 57.0 bits (136), Expect = 5e-12
 Identities = 143/641 (22%), Positives = 263/641 (41%), Gaps = 108/641 (16%)

Query: 372 LLAQENVQQAVAKAERELQLATQNALNLQQASEKLEQELQNQRLEWEQQ-------QRQL 424
           LLAQ+ +++  AKA +  +L     + ++Q    ++++      E  +        QR L
Sbjct: 183 LLAQDQIRELGAKATQTAKLLKAGLVAIRQELSVIDEDEAEVVRELAKAVDAPARVQRAL 242

Query: 425 TRLEVQKARMNQL--------VQQVQARERE--QSLLNELQTAQQALLRFEQQHHHIQTQ 474
               +  A++ +L         Q+ Q+RE +  +S L E ++A QA  R       +   
Sbjct: 243 ADAAMATAKLEELRQSCARLVAQRDQSRETDARRSQLQEERSAAQAADRAA-----VSDL 297

Query: 475 AEQAKLTADKLEFAWHTQRAAELALALTQNEPCPV-----CGSLEHPNKAQYSGDVVTKV 529
            E+ +L   +LE     QR A+      Q     +     CG+L   ++A      V ++
Sbjct: 298 GERERLDRQRLERL--DQRTAQRVAQARQRRDRSLAVQAQCGALL--SRASLVERAVRRL 353

Query: 530 QV-EQARQQQQDWVQRQQEAFHAWQQQGFKTEQIAQNLTTLSSELTLQQVALLNELIEQQ 588
            + E+A   + D VQ+++ A  +W+Q        AQ +  +  E    Q AL  + + ++
Sbjct: 354 PLAERALAARADRVQQERAAVASWEQARSAVRLGAQRIEAIEREAG--QAALRAQSLGRR 411

Query: 589 QILHSDIAALQQLNPDLLKRQIEEGEQRLAHTKMTLEKQNQNQQQAWQTLAQLQAELASL 648
             L  ++                        + + ++   Q    A +  A + +    L
Sbjct: 412 FALTREVPC----------------------SGLPMQGDCQLLADAREAKALIPSAEGVL 449

Query: 649 RQEIPPELSDLDTLRSAIGRVQNQIEILQKAEHTAR--EQWVQAQKQFASVQAAYQAAIE 706
           R+ +  +   +  L++A GRV    + L  AE   R  EQ ++  ++ AS  A       
Sbjct: 450 RRLVDEKAQAVVELQAARGRV----DALSAAEAQLRLAEQRLERGRERASRLALLAG--- 502

Query: 707 AHRESQRQQEETTSAWQQGLLHSGFSDESAYLAARLTDEAIVNIERQIAQYEERSAMLS- 765
                  + EE TSA +Q L+     DE    AA  + ++    E    + EER A+L+ 
Sbjct: 503 -------KAEEMTSA-RQRLVEV---DEELKSAAEGSGDSAQARE----ECEERDAILAS 547

Query: 766 -----GEQQALSRKLAEKNRPELEPLLVKVTQ---------AEEKMALALQAFTQHQSRM 811
                G++ A S KL +K    ++ +L+ +           AE +   A+      Q+  
Sbjct: 548 LRGIEGQRSAQSEKL-QKTLAGIDAVLLALPMPFGARSLHTAEAERDRAMAQCEAAQACH 606

Query: 812 DGLQRVAKQLADLYQKNRALE-----AEYQVVGTLSDIANGKTGAKVSLHRFVLGVLLDD 866
               R +  LA+L +   AL       ++Q     + +A+    A+   +  ++ + +DD
Sbjct: 607 LAAVRQSHVLAELRRSQEALAQRRDTVQWQAKRVENAVADWTLLARCMSNDGLIALAIDD 666

Query: 867 ----VLLQASQRLMKMSRGRYLLK--RKEERAKGNVGSGLDLMVEDSYSGKWRDVATLSG 920
               +   A+  LM     R+ +    + E AKG +  G D++V D+ SG+ + V  +SG
Sbjct: 667 AGPALSGLANDLLMACYGARFTVSIVTQAETAKGELREGFDIVVHDAESGESKSVRMMSG 726

Query: 921 GESFMAALSLALGLSDVVQAYSGGIRLDTLFIDEGFGSLDP 961
           GE       L   ++ +  A +   R  TLF DE  G+LDP
Sbjct: 727 GERVWINECLLRAVA-LYLAQTSERRYGTLFSDETDGALDP 766



 Score = 36.2 bits (82), Expect = 1e-05
 Identities = 154/726 (21%), Positives = 272/726 (37%), Gaps = 116/726 (15%)

Query: 20  IDFTKLGD-APLFLINGATGAGKSSILDAI-CYALYGETTGSERTGDQMRCDYA-APESL 76
           +DF  L D A L  I GA G GKS++LD +  +            G     D+   PES 
Sbjct: 25  LDFEALCDGAQLVAITGANGRGKSTVLDNMHPFLTMPSRVAMAGAGGFSYYDHVFLPESE 84

Query: 77  TEVIFEFELAGARYQITRQPDQEIPKKRGEGMTKKSHSATLVALKSDGNELIANKPNPVA 136
            ++ +  E  G  Y+      Q + +  G   T+    A L AL  DG          V 
Sbjct: 85  KDLTWALE--GRCYR-----TQVVIRLNGRRRTE----AYLSALADDG----------VW 123

Query: 137 KAVVELMGLDVKQFRQVMVLPQGKFRELLTANSKEREQIFGQLFQTQLYSQIERALFERA 196
           + VV    LD        V    +  E L  ++   +  F  +F  Q             
Sbjct: 124 RPVV----LDDGTVSDGKVETYTRCVEHLCGSA---DTFFTSVFGAQ------------- 163

Query: 197 AGIRKEKEEFDQQIKGTLS-VVGLESEEQLQTELTELAPVLTHAQSQLKAEQQQWDETKA 255
            G R+  +  + +IK  L+ ++  +   +L  + T+ A +L      ++ E    DE +A
Sbjct: 164 -GKRQLSDYRNGEIKSLLADLLAQDQIRELGAKATQTAKLLKAGLVAIRQELSVIDEDEA 222

Query: 256 HYQAALELEQQFIRKQQLVVEIATHQEQATHIEMLRQQRQQAQKAARLTAVHQQWHQAQK 315
                           ++V E+A   +    +     QR  A  AA  TA  ++  Q+  
Sbjct: 223 ----------------EVVRELAKAVDAPARV-----QRALAD-AAMATAKLEELRQSCA 260

Query: 316 NLQQAKLKVEQQQTLLQQAKAQQQQAQQASQQASLACEEVPKLNEQRITWQRAEQKLLAQ 375
            L   + +  +      Q + ++  AQ A + A     E  +L+ QR+  +R +Q+    
Sbjct: 261 RLVAQRDQSRETDARRSQLQEERSAAQAADRAAVSDLGERERLDRQRL--ERLDQR--TA 316

Query: 376 ENVQQAVAKAERELQLATQNALNLQQASEKLEQELQNQRLEWEQQQRQLTRLEVQKARMN 435
           + V QA  + +R L +  Q    L +AS                 +R + RL + +  + 
Sbjct: 317 QRVAQARQRRDRSLAVQAQCGALLSRAS---------------LVERAVRRLPLAERALA 361

Query: 436 QLVQQVQAREREQSLLNELQTAQQALLRFEQQHHHIQTQAEQAKLTADKLEFAWHTQRAA 495
               +VQ   +E++ +   + A+ A+    Q+   I+ +A QA L A  L   +   R  
Sbjct: 362 ARADRVQ---QERAAVASWEQARSAVRLGAQRIEAIEREAGQAALRAQSLGRRFALTREV 418

Query: 496 ELALALTQNEPCPVCGSLEHPNKAQYSGDVVTKVQVEQARQQ--QQDWVQRQQEAFHAWQ 553
             +  L     C +            S + V +  V++  Q   +    + + +A  A +
Sbjct: 419 PCS-GLPMQGDCQLLADAREAKALIPSAEGVLRRLVDEKAQAVVELQAARGRVDALSAAE 477

Query: 554 QQGFKTEQIAQNLTTLSSELTL------QQVALLNELIEQQQILHSDIAALQQLNPDLLK 607
            Q    EQ  +     +S L L      +  +    L+E  + L S  AA    +    +
Sbjct: 478 AQLRLAEQRLERGRERASRLALLAGKAEEMTSARQRLVEVDEELKS--AAEGSGDSAQAR 535

Query: 608 RQIEEGEQRLAHTKMTLEKQNQNQQQAWQTLAQLQAELASLRQEIPPELSDLDTLRSAIG 667
            + EE +  LA  +    +++   ++  +TLA + A L +L   +P     L T  +   
Sbjct: 536 EECEERDAILASLRGIEGQRSAQSEKLQKTLAGIDAVLLAL--PMPFGARSLHTAEAERD 593

Query: 668 RVQNQIEILQKAEHTAREQWVQAQKQFASVQAAYQAAIEAHRESQRQQEETTSAWQQGLL 727
           R   Q E  Q A H A           A  Q+   A +   +E+  Q+ +T   WQ   +
Sbjct: 594 RAMAQCEAAQ-ACHLA-----------AVRQSHVLAELRRSQEALAQRRDTVQ-WQAKRV 640

Query: 728 HSGFSD 733
            +  +D
Sbjct: 641 ENAVAD 646