Pairwise Alignments

Query, 379 a.a., exonuclease sbcCD subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., exonuclease sbcCD subunit D from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  103 bits (258), Expect = 7e-27
 Identities = 86/340 (25%), Positives = 148/340 (43%), Gaps = 20/340 (5%)

Query: 1   MKFLHTSDWHLGRQFHQVSLLDDQSAVLAQLIDFLRDNPVDAVIVAGDIYDRSIPPTAAI 60
           M+ LHTSDWHLG++   +   ++    L  L+  +    V+ ++++GD++D   P   A+
Sbjct: 1   MRVLHTSDWHLGQRLVNLERTEEHQHFLNWLLQTIEQEQVEVLLMSGDVFDNGAPSNTAL 60

Query: 61  DLLDEVVSVICGELKTPLLMIPGNHDGAKRLGFAAKQMKNSGLHIF--ADFEQMMQPLVL 118
            L  + +  +C      +++  GNHD    L    + ++   +++   A  + + + + L
Sbjct: 61  KLYYDFLRRVCATCCRHIIITGGNHDSISTLNAPKELLECFNIYVVGGASHDPLDELIEL 120

Query: 119 HSPQAG-EVAFWGMPYHDPELVRHYYHNDITTHDAAHQFLCESILA---------QRNPS 168
                  ++A   +P+     VR     +  T +   Q + + I A         Q+   
Sbjct: 121 RGENGELQLAVCAVPFLRDRDVRLSVAGE--TFEEREQRIKQGIAAHYEAFVPHVQKYKD 178

Query: 169 QR--HVLISHCFVDGAMESESERPLSIGGSDRVDHRHF-LPFDYVALGHLHQP-QMKGAE 224
           QR   V + H F  G   SESE+ + +G   ++    F   FDYVALGHLH+P Q+    
Sbjct: 179 QRVPVVAMGHLFAAGGAASESEKEIHVGNLGQIGADQFPKEFDYVALGHLHRPQQVNKTH 238

Query: 225 HIRYSGSLMKYSFGEQHQNKGATLVELGQQGFISATHIPLIAPHQMRIIEGELEAILAAG 284
           HIRYSGS +  SF E    K   +++           + +    ++   +G LE +    
Sbjct: 239 HIRYSGSPISLSFSEVTDTKVIFILDFADGKLQDLRELEIPCCRKLIRFKGSLEKV-KQQ 297

Query: 285 ATDPQADDYLLVRLLDKHAILD-PMEKLRQVYPNVLHLEK 323
            T      Y L    +    LD P+  L Q    VL L+K
Sbjct: 298 LTVYDNSAYTLTAWAELQLELDAPLPDLNQQLEEVLSLKK 337