Pairwise Alignments

Query, 379 a.a., exonuclease sbcCD subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., Exodeoxyribonuclease I subunit D (EC 3.1.11.1) from Enterobacter asburiae PDN3

 Score =  119 bits (298), Expect = 1e-31
 Identities = 89/295 (30%), Positives = 139/295 (47%), Gaps = 17/295 (5%)

Query: 1   MKFLHTSDWHLGRQFHQVSLLDDQSAVLAQLIDFLRDNPVDAVIVAGDIYDRSIPPTAAI 60
           M+ LHTSDWHLG+ F+  S   +  A L  L++  R + VDA+IVAGDI+D   PP+ A 
Sbjct: 1   MRILHTSDWHLGQNFYSKSRAAEHEAFLNWLLETARTHEVDAIIVAGDIFDTGSPPSYAR 60

Query: 61  DLLDEVVSVICGELKTPLLMIPGNHDGAKRLGFAAKQMKNSGLHIFADFEQMMQPLVLHS 120
           +L +  V V   +    L+++ GNHD    L  +   +      + A      Q L    
Sbjct: 61  ELYNRFV-VNLQQTGCHLVIVAGNHDSVATLNESRDILAFLNTTVVASAGHAPQILKKRD 119

Query: 121 PQAGEVAFWGMPYHDPELV----------RHYYHNDITTHDAAHQFLCESILAQRNPSQR 170
              G V    +P+  P  +              H      D  HQ   ++   + +    
Sbjct: 120 GTPGAV-LCPIPFLRPRDIVQSQAGLSGAEKQQHLLQAITDYYHQQHADACALRGDQPIP 178

Query: 171 HVLISHCFVDGAMESESERPLSIGGSDRVDHRHFLPFDYVALGHLHQPQ-MKGAEHIRYS 229
            +   H    GA +S++ R + IG  D    ++F P DY+ALGH+H+ Q + G+EHIRY 
Sbjct: 179 VIATGHLTTVGASKSDAVREIYIGTLDAFPAQNFPPADYIALGHIHRAQIVGGSEHIRYC 238

Query: 230 GSLMKYSFGEQHQNKGATLVEL--GQQGFISATHIPLIAPHQMRIIEGELEAILA 282
           GS +  SF E  + K   LV    G+   +    +P+  P  + +++G+L+AI A
Sbjct: 239 GSPISLSFDETGKAKSVHLVSFSEGKLHAVETLAVPVTQP--LAVLKGDLDAITA 291