Pairwise Alignments

Query, 379 a.a., exonuclease sbcCD subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., exonuclease subunit SbcD from Dickeya dianthicola ME23

 Score =  124 bits (311), Expect = 5e-33
 Identities = 98/303 (32%), Positives = 148/303 (48%), Gaps = 31/303 (10%)

Query: 1   MKFLHTSDWHLGRQFHQVSLLDDQSAVLAQLIDFLRDNPVDAVIVAGDIYDRSIPPTAAI 60
           M+ +HTSDWHLG+ F+  S   +  A L  L+  +  +  DAVIVAGD++D   PP+ A 
Sbjct: 1   MRIIHTSDWHLGQYFYTRSRAPEHQAFLHWLVQQVEQHQADAVIVAGDVFDNGAPPSYAR 60

Query: 61  DLLDEVVSVICGELKTPLLMIPGNHDGAKRLGFAAKQMKNSGLHIFADFEQMM--QPLVL 118
           ++ ++ V V        L+++ GNHD    L  +   +      + A F+  +  Q LVL
Sbjct: 61  EMYNQFV-VALQRTGCQLVVMGGNHDSVATLNESRALLACLNTRVVAGFDGDIHEQVLVL 119

Query: 119 HSPQAGE--VAFWGMPYHDPELV------------RHYYHNDITTH-DAAHQFLCESILA 163
           ++ +AGE       +P+  P  +            +    + IT+H    +Q  CE    
Sbjct: 120 NN-RAGEPGALLCAVPFLRPRDLLTSQAGQSGVQKQQALQDAITSHYQRCYQLACE---- 174

Query: 164 QRNPSQRH---VLISHCFVDGAMESESERPLSIGGSDRVDHRHFLPFDYVALGHLHQPQ- 219
           QR    R    VL  H    G   S+S R + IG  D    + F P DY+ALGH+H+PQ 
Sbjct: 175 QRETLGRELPIVLTGHLTTVGVATSDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRPQR 234

Query: 220 MKGAEHIRYSGSLMKYSFGEQHQNKGATLV--ELGQQGFISATHIPLIAPHQMRIIEGEL 277
           +   EHIRYSGS +  SF E +  K   LV  E G+   ++A  +P   P  M++++G L
Sbjct: 235 VAQCEHIRYSGSPIPLSFDELNHEKSVYLVHFEQGKLQEVAALTVPTEQP--MQLVKGNL 292

Query: 278 EAI 280
             I
Sbjct: 293 SEI 295